scalar_advection_elements.h
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26 // Header file for scalar advection elements
27 
28 #ifndef OOMPH_SCALAR_ADVECTION_ELEMENTS_HEADER
29 #define OOMPH_SCALAR_ADVECTION_ELEMENTS_HEADER
30 
31 // Config header generated by autoconfig
32 #ifdef HAVE_CONFIG_H
33 #include <oomph-lib-config.h>
34 #endif
35 
37 #include "../generic/Qelements.h"
38 #include "../generic/Qspectral_elements.h"
39 #include "../generic/dg_elements.h"
40 
41 namespace oomph
42 {
43  //==============================================================
44  /// Base class for advection equations
45  //=============================================================
46  template<unsigned DIM>
48  {
49  /// Typedef for a wind function as a possible function of position
50  typedef void (*ScalarAdvectionWindFctPt)(const Vector<double>& x,
51  Vector<double>& wind);
52 
53  /// Function pointer to the wind function
55 
56  protected:
57  /// A single flux is interpolated
58  inline unsigned nflux() const
59  {
60  return 1;
61  }
62 
63  /// Return the flux as a function of the unknown
64  void flux(const Vector<double>& u, DenseMatrix<double>& f);
65 
66  /// Return the flux derivatives as a function of the unknowns
67  void dflux_du(const Vector<double>& u, RankThreeTensor<double>& df_du);
68 
69  /// Return the wind at a given position
70  inline virtual void get_wind_scalar_adv(const unsigned& ipt,
71  const Vector<double>& s,
72  const Vector<double>& x,
73  Vector<double>& wind) const
74  {
75  // If no wind function has been set, return zero
76  if (Wind_fct_pt == 0)
77  {
78  for (unsigned i = 0; i < DIM; i++)
79  {
80  wind[i] = 0.0;
81  }
82  }
83  else
84  {
85  // Get wind
86  (*Wind_fct_pt)(x, wind);
87  }
88  }
89 
90  public:
91  /// Constructor
93  {
94  }
95 
96  /// Access function: Pointer to wind function
98  {
99  return Wind_fct_pt;
100  }
101 
102  /// Access function: Pointer to wind function. Const version
104  {
105  return Wind_fct_pt;
106  }
107 
108  /// The number of unknowns at each node is the number of values
109  unsigned required_nvalue(const unsigned& n) const
110  {
111  return 1;
112  }
113 
114  /// Compute the error and norm of solution integrated over the element
115  /// Does not plot the error in the outfile
117  std::ostream& outfile,
118  FiniteElement::UnsteadyExactSolutionFctPt initial_condition_pt,
119  const double& t,
120  Vector<double>& error,
121  Vector<double>& norm)
122  {
123  // Find the number of fluxes
124  const unsigned n_flux = this->nflux();
125  // Find the number of nodes
126  const unsigned n_node = this->nnode();
127  // Storage for the shape function and derivatives of shape function
128  Shape psi(n_node);
129  DShape dpsidx(n_node, DIM);
130 
131  // Find the number of integration points
132  unsigned n_intpt = this->integral_pt()->nweight();
133 
134  error.resize(n_flux);
135  norm.resize(n_flux);
136  for (unsigned i = 0; i < n_flux; i++)
137  {
138  error[i] = 0.0;
139  norm[i] = 0.0;
140  }
141 
142  Vector<double> s(DIM);
143 
144  // Loop over the integration points
145  for (unsigned ipt = 0; ipt < n_intpt; ipt++)
146  {
147  // Get the shape functions at the knot
148  double J = this->dshape_eulerian_at_knot(ipt, psi, dpsidx);
149 
150  // Get the integral weight
151  double W = this->integral_pt()->weight(ipt) * J;
152 
153  // Storage for the local functions
154  Vector<double> interpolated_x(DIM, 0.0);
155  Vector<double> interpolated_u(n_flux, 0.0);
156 
157  // Loop over the shape functions
158  for (unsigned l = 0; l < n_node; l++)
159  {
160  // Locally cache the shape function
161  const double psi_ = psi(l);
162  for (unsigned i = 0; i < DIM; i++)
163  {
164  interpolated_x[i] += this->nodal_position(l, i) * psi_;
165  }
166 
167  for (unsigned i = 0; i < n_flux; i++)
168  {
169  // Calculate the velocity and tangent vector
170  interpolated_u[i] += this->nodal_value(l, i) * psi_;
171  }
172  }
173 
174  // Get the global wind
175  Vector<double> wind(DIM);
176  this->get_wind_scalar_adv(ipt, s, interpolated_x, wind);
177 
178  // Rescale the position
179  for (unsigned i = 0; i < DIM; i++)
180  {
181  interpolated_x[i] -= wind[i] * t;
182  }
183 
184  // Now get the initial condition at this value of x
185  Vector<double> exact_u(n_flux, 0.0);
186  (*initial_condition_pt)(0.0, interpolated_x, exact_u);
187 
188  // Loop over the unknowns
189  for (unsigned i = 0; i < n_flux; i++)
190  {
191  error[i] += pow((interpolated_u[i] - exact_u[i]), 2.0) * W;
192  norm[i] += interpolated_u[i] * interpolated_u[i] * W;
193  }
194  }
195  }
196  };
197 
198 
199  template<unsigned DIM, unsigned NNODE_1D>
201  : public virtual QSpectralElement<DIM, NNODE_1D>,
202  public virtual ScalarAdvectionEquations<DIM>
203  {
204  public:
205  /// Constructor: Call constructors for QElement and
206  /// Advection Diffusion equations
208  : QSpectralElement<DIM, NNODE_1D>(), ScalarAdvectionEquations<DIM>()
209  {
210  }
211 
212  /// Broken copy constructor
214  const QSpectralScalarAdvectionElement<DIM, NNODE_1D>& dummy) = delete;
215 
216  /// Broken assignment operator
217  // Commented out broken assignment operator because this can lead to a
218  // conflict warning when used in the virtual inheritence hierarchy.
219  // Essentially the compiler doesn't realise that two separate
220  // implementations of the broken function are the same and so, quite
221  // rightly, it shouts.
222  /*void operator=(
223  const QSpectralScalarAdvectionElement<DIM,NNODE_1D>&) = delete;*/
224 
225  /// Required # of `values' (pinned or dofs)
226  /// at node n
227  inline unsigned required_nvalue(const unsigned& n) const
228  {
229  return 1;
230  }
231 
232  /// Output function:
233  /// x,y,u or x,y,z,u
234  void output(std::ostream& outfile)
235  {
237  }
238 
239  /// Output function:
240  /// x,y,u or x,y,z,u at n_plot^DIM plot points
241  void output(std::ostream& outfile, const unsigned& n_plot)
242  {
243  ScalarAdvectionEquations<DIM>::output(outfile, n_plot);
244  }
245 
246 
247  /*/// C-style output function:
248  /// x,y,u or x,y,z,u
249  void output(FILE* file_pt)
250  {
251  ScalarAdvectionEquations<NFLUX,DIM>::output(file_pt);
252  }
253 
254  /// C-style output function:
255  /// x,y,u or x,y,z,u at n_plot^DIM plot points
256  void output(FILE* file_pt, const unsigned &n_plot)
257  {
258  ScalarAdvectionEquations<NFLUX,DIM>::output(file_pt,n_plot);
259  }
260 
261  /// Output function for an exact solution:
262  /// x,y,u_exact or x,y,z,u_exact at n_plot^DIM plot points
263  void output_fct(std::ostream &outfile, const unsigned &n_plot,
264  FiniteElement::SteadyExactSolutionFctPt
265  exact_soln_pt)
266  {
267  ScalarAdvectionEquations<NFLUX,DIM>::
268  output_fct(outfile,n_plot,exact_soln_pt);}
269 
270 
271  /// Output function for a time-dependent exact solution.
272  /// x,y,u_exact or x,y,z,u_exact at n_plot^DIM plot points
273  /// (Calls the steady version)
274  void output_fct(std::ostream &outfile, const unsigned &n_plot,
275  const double& time,
276  FiniteElement::UnsteadyExactSolutionFctPt
277  exact_soln_pt)
278  {
279  ScalarAdvectionEquations<NFLUX,DIM>::
280  output_fct(outfile,n_plot,time,exact_soln_pt);
281  }*/
282 
283 
284  protected:
285  /// Shape, test functions & derivs. w.r.t. to global coords. Return
286  /// Jacobian.
288  const Vector<double>& s,
289  Shape& psi,
290  DShape& dpsidx,
291  Shape& test,
292  DShape& dtestdx) const;
293 
294  /// Shape, test functions & derivs. w.r.t. to global coords. at
295  /// integration point ipt. Return Jacobian.
297  const unsigned& ipt,
298  Shape& psi,
299  DShape& dpsidx,
300  Shape& test,
301  DShape& dtestdx) const;
302  };
303 
304  // Inline functions:
305 
306 
307  //======================================================================
308  /// Define the shape functions and test functions and derivatives
309  /// w.r.t. global coordinates and return Jacobian of mapping.
310  ///
311  /// Galerkin: Test functions = shape functions
312  //======================================================================
313  template<unsigned DIM, unsigned NNODE_1D>
316  Shape& psi,
317  DShape& dpsidx,
318  Shape& test,
319  DShape& dtestdx) const
320  {
321  // Call the geometrical shape functions and derivatives
322  double J = this->dshape_eulerian(s, psi, dpsidx);
323 
324  // Loop over the test functions and derivatives and set them equal to the
325  // shape functions
326  for (unsigned i = 0; i < NNODE_1D; i++)
327  {
328  test[i] = psi[i];
329  for (unsigned j = 0; j < DIM; j++)
330  {
331  dtestdx(i, j) = dpsidx(i, j);
332  }
333  }
334 
335  // Return the jacobian
336  return J;
337  }
338 
339 
340  //======================================================================
341  /// Define the shape functions and test functions and derivatives
342  /// w.r.t. global coordinates and return Jacobian of mapping.
343  ///
344  /// Galerkin: Test functions = shape functions
345  //======================================================================
346  template<unsigned DIM, unsigned NNODE_1D>
349  Shape& psi,
350  DShape& dpsidx,
351  Shape& test,
352  DShape& dtestdx) const
353  {
354  // Call the geometrical shape functions and derivatives
355  double J = this->dshape_eulerian_at_knot(ipt, psi, dpsidx);
356 
357  // Set the test functions equal to the shape functions (pointer copy)
358  test = psi;
359  dtestdx = dpsidx;
360 
361  // Return the jacobian
362  return J;
363  }
364 
365 
366  /// /////////////////////////////////////////////////////////////////////
367  /// /////////////////////////////////////////////////////////////////////
368  /// /////////////////////////////////////////////////////////////////////
369 
370 
371  //=======================================================================
372  /// Face geometry for the QScalarAdvectionElement elements:
373  /// The spatial dimension of the face elements is one lower than that
374  /// of the bulk element but they have the same number of points along
375  /// their 1D edges.
376  //=======================================================================
377  template<unsigned DIM, unsigned NNODE_1D>
379  : public virtual QSpectralElement<DIM - 1, NNODE_1D>
380  {
381  public:
382  /// Constructor: Call the constructor for the
383  /// appropriate lower-dimensional QElement
384  FaceGeometry() : QSpectralElement<DIM - 1, NNODE_1D>() {}
385  };
386 
387 
388  //======================================================================
389  /// FaceElement for Discontinuous Galerkin Problems
390  //======================================================================
391  template<class ELEMENT>
392  class DGScalarAdvectionFaceElement : public virtual FaceGeometry<ELEMENT>,
393  public virtual DGFaceElement
394  {
395  public:
396  /// Constructor
398  const int& face_index)
399  : FaceGeometry<ELEMENT>(), DGFaceElement()
400  {
401  // Attach geometric information to the element
402  // N.B. This function also assigns nbulk_value from required_nvalue
403  // of the bulk element.
404  element_pt->build_face_element(face_index, this);
405  }
406 
407 
408  // There is a single required n_flux
409  unsigned required_nflux()
410  {
411  return 1;
412  }
413 
414  /// Calculate the normal flux, so this is the dot product of the
415  /// numerical flux with n_in
416  void numerical_flux(const Vector<double>& n_out,
417  const Vector<double>& u_int,
418  const Vector<double>& u_ext,
419  Vector<double>& flux)
420  {
421  const unsigned dim = this->nodal_dimension();
422  Vector<double> Wind(dim);
423  Vector<double> s, x;
424  // Dummy integration point
425  unsigned ipt = 0;
426  dynamic_cast<ELEMENT*>(this->bulk_element_pt())
427  ->get_wind_scalar_adv(ipt, s, x, Wind);
428 
429  // Now we can work this out for standard upwind advection
430  double dot = 0.0;
431  for (unsigned i = 0; i < dim; i++)
432  {
433  dot += Wind[i] * n_out[i];
434  }
435 
436  const unsigned n_value = this->required_nflux();
437  if (dot >= 0.0)
438  {
439  for (unsigned n = 0; n < n_value; n++)
440  {
441  flux[n] = dot * u_int[n];
442  }
443  }
444  else
445  {
446  for (unsigned n = 0; n < n_value; n++)
447  {
448  flux[n] = dot * u_ext[n];
449  }
450  }
451 
452  // flux[0] = 0.5*(u_int[0]+u_ext[0])*n_out[0];
453  }
454  };
455 
456  //=================================================================
457  /// General DGScalarAdvectionClass. Establish the template parameters
458  //===================================================================
459  template<unsigned DIM, unsigned NNODE_1D>
461  {
462  };
463 
464 
465  //==================================================================
466  // Specialization for 1D DG Advection element
467  //==================================================================
468  template<unsigned NNODE_1D>
470  : public QSpectralScalarAdvectionElement<1, NNODE_1D>, public DGElement
471  {
472  friend class DGScalarAdvectionFaceElement<
473  DGSpectralScalarAdvectionElement<1, NNODE_1D>>;
474 
476 
477  public:
478  // There is a single required n_flux
479  unsigned required_nflux()
480  {
481  return 1;
482  }
483 
484  // Calculate averages
485  void calculate_element_averages(double*& average_value)
486  {
488  }
489 
490  // Constructor
492  : QSpectralScalarAdvectionElement<1, NNODE_1D>(), DGElement()
493  {
494  }
495 
497 
499  {
500  // Make the two faces
501  Face_element_pt.resize(2);
502  // Make the face on the left
503  Face_element_pt[0] = new DGScalarAdvectionFaceElement<
505  // Make the face on the right
506  Face_element_pt[1] = new DGScalarAdvectionFaceElement<
508  }
509 
510 
511  /// Compute the residuals for the Navier--Stokes equations;
512  /// flag=1(or 0): do (or don't) compute the Jacobian as well.
514  Vector<double>& residuals,
515  DenseMatrix<double>& jacobian,
516  DenseMatrix<double>& mass_matrix,
517  unsigned flag)
518  {
521  residuals, jacobian, mass_matrix, flag);
522 
523  this->add_flux_contributions_to_residuals(residuals, jacobian, flag);
524  }
525 
526 
527  //============================================================================
528  /// Function that returns the current value of the residuals
529  /// multiplied by the inverse mass matrix (virtual so that it can be
530  /// overloaded specific elements in which time and memory saving tricks can
531  /// be applied)
532  //============================================================================
534  {
535  // If there are external data this is not going to work
536  if (nexternal_data() > 0)
537  {
538  std::ostringstream error_stream;
539  error_stream
540  << "Cannot use a discontinuous formulation for the mass matrix when\n"
541  << "there are external data.\n "
542  << "Do not call Problem::enable_discontinuous_formulation()\n";
543 
544  throw OomphLibError(
545  error_stream.str(), OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION);
546  }
547 
548 
549  // Now let's assemble stuff
550  const unsigned n_dof = this->ndof();
551 
552  // Resize and initialise the vector that will holds the residuals
553  minv_res.resize(n_dof);
554  for (unsigned n = 0; n < n_dof; n++)
555  {
556  minv_res[n] = 0.0;
557  }
558 
559  // If we are recycling the mass matrix
560  if (Mass_matrix_reuse_is_enabled && Mass_matrix_has_been_computed)
561  {
562  // Get the residuals
563  this->fill_in_contribution_to_residuals(minv_res);
564  }
565  // Otherwise
566  else
567  {
568  // Temporary mass matrix
569  DenseDoubleMatrix M(n_dof, n_dof, 0.0);
570 
571  // Get the local mass matrix and residuals
572  this->fill_in_contribution_to_mass_matrix(minv_res, M);
573 
574  // Store the diagonal entries
575  Inverse_mass_diagonal.clear();
576  for (unsigned n = 0; n < n_dof; n++)
577  {
578  Inverse_mass_diagonal.push_back(1.0 / M(n, n));
579  }
580 
581  // The mass matrix has been computed
582  Mass_matrix_has_been_computed = true;
583  }
584 
585  for (unsigned n = 0; n < n_dof; n++)
586  {
587  minv_res[n] *= Inverse_mass_diagonal[n];
588  }
589  }
590  };
591 
592 
593  //=======================================================================
594  /// Face geometry of the 1D DG elements
595  //=======================================================================
596  template<unsigned NNODE_1D>
598  : public virtual PointElement
599  {
600  public:
602  };
603 
604 
605  //==================================================================
606  /// Specialisation for 2D DG Elements
607  //==================================================================
608  template<unsigned NNODE_1D>
610  : public QSpectralScalarAdvectionElement<2, NNODE_1D>, public DGElement
611  {
612  friend class DGScalarAdvectionFaceElement<
613  DGSpectralScalarAdvectionElement<2, NNODE_1D>>;
614 
615  public:
616  // Calculate averages
617  void calculate_element_averages(double*& average_value)
618  {
620  }
621 
622  // There is a single required n_flux
623  unsigned required_nflux()
624  {
625  return 1;
626  }
627 
628  // Constructor
630  : QSpectralScalarAdvectionElement<2, NNODE_1D>(), DGElement()
631  {
632  }
633 
635 
637  {
638  Face_element_pt.resize(4);
639  Face_element_pt[0] = new DGScalarAdvectionFaceElement<
641  Face_element_pt[1] = new DGScalarAdvectionFaceElement<
643  Face_element_pt[2] = new DGScalarAdvectionFaceElement<
645  Face_element_pt[3] = new DGScalarAdvectionFaceElement<
647  }
648 
649 
650  /// Compute the residuals for the Navier--Stokes equations;
651  /// flag=1(or 0): do (or don't) compute the Jacobian as well.
653  Vector<double>& residuals,
654  DenseMatrix<double>& jacobian,
655  DenseMatrix<double>& mass_matrix,
656  unsigned flag)
657  {
660  residuals, jacobian, mass_matrix, flag);
661 
662  this->add_flux_contributions_to_residuals(residuals, jacobian, flag);
663  }
664  };
665 
666 
667  //=======================================================================
668  /// Face geometry of the DG elements
669  //=======================================================================
670  template<unsigned NNODE_1D>
672  : public virtual QSpectralElement<1, NNODE_1D>
673  {
674  public:
675  FaceGeometry() : QSpectralElement<1, NNODE_1D>() {}
676  };
677 
678 
679  //=============================================================
680  /// Non-spectral version of the classes
681  //============================================================
682  template<unsigned DIM, unsigned NNODE_1D>
683  class QScalarAdvectionElement : public virtual QElement<DIM, NNODE_1D>,
684  public virtual ScalarAdvectionEquations<DIM>
685  {
686  public:
687  /// Constructor: Call constructors for QElement and
688  /// Advection Diffusion equations
690  : QElement<DIM, NNODE_1D>(), ScalarAdvectionEquations<DIM>()
691  {
692  }
693 
694  /// Broken copy constructor
696  const QScalarAdvectionElement<DIM, NNODE_1D>& dummy) = delete;
697 
698  /// Broken assignment operator
699  /*void operator=(
700  const QScalarAdvectionElement<DIM,NNODE_1D>&) = delete;*/
701 
702  /// Required # of `values' (pinned or dofs)
703  /// at node n
704  inline unsigned required_nvalue(const unsigned& n) const
705  {
706  return 1;
707  }
708 
709  /// Output function:
710  /// x,y,u or x,y,z,u
711  void output(std::ostream& outfile)
712  {
714  }
715 
716  /// Output function:
717  /// x,y,u or x,y,z,u at n_plot^DIM plot points
718  void output(std::ostream& outfile, const unsigned& n_plot)
719  {
720  ScalarAdvectionEquations<DIM>::output(outfile, n_plot);
721  }
722 
723 
724  /*/// C-style output function:
725  /// x,y,u or x,y,z,u
726  void output(FILE* file_pt)
727  {
728  ScalarAdvectionEquations<NFLUX,DIM>::output(file_pt);
729  }
730 
731  /// C-style output function:
732  /// x,y,u or x,y,z,u at n_plot^DIM plot points
733  void output(FILE* file_pt, const unsigned &n_plot)
734  {
735  ScalarAdvectionEquations<NFLUX,DIM>::output(file_pt,n_plot);
736  }
737 
738  /// Output function for an exact solution:
739  /// x,y,u_exact or x,y,z,u_exact at n_plot^DIM plot points
740  void output_fct(std::ostream &outfile, const unsigned &n_plot,
741  FiniteElement::SteadyExactSolutionFctPt
742  exact_soln_pt)
743  {
744  ScalarAdvectionEquations<NFLUX,DIM>::
745  output_fct(outfile,n_plot,exact_soln_pt);}
746 
747 
748  /// Output function for a time-dependent exact solution.
749  /// x,y,u_exact or x,y,z,u_exact at n_plot^DIM plot points
750  /// (Calls the steady version)
751  void output_fct(std::ostream &outfile, const unsigned &n_plot,
752  const double& time,
753  FiniteElement::UnsteadyExactSolutionFctPt
754  exact_soln_pt)
755  {
756  ScalarAdvectionEquations<NFLUX,DIM>::
757  output_fct(outfile,n_plot,time,exact_soln_pt);
758  }*/
759 
760 
761  protected:
762  /// Shape, test functions & derivs. w.r.t. to global coords. Return
763  /// Jacobian.
765  const Vector<double>& s,
766  Shape& psi,
767  DShape& dpsidx,
768  Shape& test,
769  DShape& dtestdx) const;
770 
771  /// Shape, test functions & derivs. w.r.t. to global coords. at
772  /// integration point ipt. Return Jacobian.
774  const unsigned& ipt,
775  Shape& psi,
776  DShape& dpsidx,
777  Shape& test,
778  DShape& dtestdx) const;
779  };
780 
781  // Inline functions:
782 
783 
784  //======================================================================
785  /// Define the shape functions and test functions and derivatives
786  /// w.r.t. global coordinates and return Jacobian of mapping.
787  ///
788  /// Galerkin: Test functions = shape functions
789  //======================================================================
790  template<unsigned DIM, unsigned NNODE_1D>
793  Shape& psi,
794  DShape& dpsidx,
795  Shape& test,
796  DShape& dtestdx) const
797  {
798  // Call the geometrical shape functions and derivatives
799  double J = this->dshape_eulerian(s, psi, dpsidx);
800 
801  // Loop over the test functions and derivatives and set them equal to the
802  // shape functions
803  for (unsigned i = 0; i < NNODE_1D; i++)
804  {
805  test[i] = psi[i];
806  for (unsigned j = 0; j < DIM; j++)
807  {
808  dtestdx(i, j) = dpsidx(i, j);
809  }
810  }
811 
812  // Return the jacobian
813  return J;
814  }
815 
816 
817  //======================================================================
818  /// Define the shape functions and test functions and derivatives
819  /// w.r.t. global coordinates and return Jacobian of mapping.
820  ///
821  /// Galerkin: Test functions = shape functions
822  //======================================================================
823  template<unsigned DIM, unsigned NNODE_1D>
826  Shape& psi,
827  DShape& dpsidx,
828  Shape& test,
829  DShape& dtestdx) const
830  {
831  // Call the geometrical shape functions and derivatives
832  double J = this->dshape_eulerian_at_knot(ipt, psi, dpsidx);
833 
834  // Set the test functions equal to the shape functions (pointer copy)
835  test = psi;
836  dtestdx = dpsidx;
837 
838  // Return the jacobian
839  return J;
840  }
841 
842 
843  /// /////////////////////////////////////////////////////////////////////
844  /// /////////////////////////////////////////////////////////////////////
845  /// /////////////////////////////////////////////////////////////////////
846 
847 
848  //=======================================================================
849  /// Face geometry for the QScalarAdvectionElement elements:
850  /// The spatial dimension of the face elements is one lower than that
851  /// of the bulk element but they have the same number of points along
852  /// their 1D edges.
853  //=======================================================================
854  template<unsigned DIM, unsigned NNODE_1D>
855  class FaceGeometry<QScalarAdvectionElement<DIM, NNODE_1D>>
856  : public virtual QElement<DIM - 1, NNODE_1D>
857  {
858  public:
859  /// Constructor: Call the constructor for the
860  /// appropriate lower-dimensional QElement
861  FaceGeometry() : QElement<DIM - 1, NNODE_1D>() {}
862  };
863 
864 
865  //=================================================================
866  /// General DGScalarAdvectionClass. Establish the template parameters
867  //===================================================================
868  template<unsigned DIM, unsigned NNODE_1D>
870  {
871  };
872 
873 
874  //==================================================================
875  // Specialization for 1D DG Advection element
876  //==================================================================
877  template<unsigned NNODE_1D>
878  class DGScalarAdvectionElement<1, NNODE_1D>
879  : public QScalarAdvectionElement<1, NNODE_1D>, public DGElement
880  {
881  friend class DGScalarAdvectionFaceElement<
882  DGScalarAdvectionElement<1, NNODE_1D>>;
883 
884  public:
885  // There is a single required n_flux
886  unsigned required_nflux()
887  {
888  return 1;
889  }
890 
891  // Calculate averages
892  void calculate_element_averages(double*& average_value)
893  {
895  }
896 
897  // Constructor
899  : QScalarAdvectionElement<1, NNODE_1D>(), DGElement()
900  {
901  }
902 
904 
906  {
907  // Make the two faces
908  Face_element_pt.resize(2);
909  // Make the face on the left
910  Face_element_pt[0] =
912  this, -1);
913  // Make the face on the right
914  Face_element_pt[1] =
916  this, +1);
917  }
918 
919 
920  /// Compute the residuals for the Navier--Stokes equations;
921  /// flag=1(or 0): do (or don't) compute the Jacobian as well.
923  Vector<double>& residuals,
924  DenseMatrix<double>& jacobian,
925  DenseMatrix<double>& mass_matrix,
926  unsigned flag)
927  {
930  residuals, jacobian, mass_matrix, flag);
931 
932  this->add_flux_contributions_to_residuals(residuals, jacobian, flag);
933  }
934  };
935 
936 
937  //=======================================================================
938  /// Face geometry of the 1D DG elements
939  //=======================================================================
940  template<unsigned NNODE_1D>
942  : public virtual PointElement
943  {
944  public:
946  };
947 
948 
949  //==================================================================
950  /// Specialisation for 2D DG Elements
951  //==================================================================
952  template<unsigned NNODE_1D>
953  class DGScalarAdvectionElement<2, NNODE_1D>
954  : public QScalarAdvectionElement<2, NNODE_1D>, public DGElement
955  {
956  friend class DGScalarAdvectionFaceElement<
957  DGScalarAdvectionElement<2, NNODE_1D>>;
958 
959  public:
960  // There is a single required n_flux
961  unsigned required_nflux()
962  {
963  return 1;
964  }
965 
966  // Calculate averages
967  void calculate_element_averages(double*& average_value)
968  {
970  }
971 
972  // Constructor
974  : QScalarAdvectionElement<2, NNODE_1D>(), DGElement()
975  {
976  }
977 
979 
981  {
982  Face_element_pt.resize(4);
983  Face_element_pt[0] =
985  this, 2);
986  Face_element_pt[1] =
988  this, 1);
989  Face_element_pt[2] =
991  this, -2);
992  Face_element_pt[3] =
994  this, -1);
995  }
996 
997 
998  /// Compute the residuals for the Navier--Stokes equations;
999  /// flag=1(or 0): do (or don't) compute the Jacobian as well.
1001  Vector<double>& residuals,
1002  DenseMatrix<double>& jacobian,
1003  DenseMatrix<double>& mass_matrix,
1004  unsigned flag)
1005  {
1008  residuals, jacobian, mass_matrix, flag);
1009 
1010  this->add_flux_contributions_to_residuals(residuals, jacobian, flag);
1011  }
1012  };
1013 
1014 
1015  //=======================================================================
1016  /// Face geometry of the DG elements
1017  //=======================================================================
1018  template<unsigned NNODE_1D>
1020  : public virtual QElement<1, NNODE_1D>
1021  {
1022  public:
1023  FaceGeometry() : QElement<1, NNODE_1D>() {}
1024  };
1025 
1026 
1027 } // namespace oomph
1028 
1029 #endif
static char t char * s
Definition: cfortran.h:568
cstr elem_len * i
Definition: cfortran.h:603
char t
Definition: cfortran.h:568
A Base class for DGElements.
Definition: dg_elements.h:161
Base class for Discontinuous Galerkin Faces. These are responsible for calculating the normal fluxes ...
Definition: dg_elements.h:50
unsigned required_nflux()
Set the number of flux components.
void calculate_element_averages(double *&average_value)
Calculate the averages in the element.
void fill_in_generic_residual_contribution_flux_transport(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)
Compute the residuals for the Navier–Stokes equations; flag=1(or 0): do (or don't) compute the Jacobi...
void fill_in_generic_residual_contribution_flux_transport(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)
Compute the residuals for the Navier–Stokes equations; flag=1(or 0): do (or don't) compute the Jacobi...
unsigned required_nflux()
Set the number of flux components.
void calculate_element_averages(double *&average_value)
Calculate the averages in the element.
General DGScalarAdvectionClass. Establish the template parameters.
FaceElement for Discontinuous Galerkin Problems.
DGScalarAdvectionFaceElement(FiniteElement *const &element_pt, const int &face_index)
Constructor.
unsigned required_nflux()
Set the number of flux components.
void numerical_flux(const Vector< double > &n_out, const Vector< double > &u_int, const Vector< double > &u_ext, Vector< double > &flux)
Calculate the normal flux, so this is the dot product of the numerical flux with n_in.
unsigned required_nflux()
Set the number of flux components.
void calculate_element_averages(double *&average_value)
Calculate the averages in the element.
void fill_in_generic_residual_contribution_flux_transport(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)
Compute the residuals for the Navier–Stokes equations; flag=1(or 0): do (or don't) compute the Jacobi...
void get_inverse_mass_matrix_times_residuals(Vector< double > &minv_res)
Function that returns the current value of the residuals multiplied by the inverse mass matrix (virtu...
unsigned required_nflux()
Set the number of flux components.
void calculate_element_averages(double *&average_value)
Calculate the averages in the element.
void fill_in_generic_residual_contribution_flux_transport(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)
Compute the residuals for the Navier–Stokes equations; flag=1(or 0): do (or don't) compute the Jacobi...
General DGScalarAdvectionClass. Establish the template parameters.
A Class for the derivatives of shape functions The class design is essentially the same as Shape,...
Definition: shape.h:278
Class of matrices containing doubles, and stored as a DenseMatrix<double>, but with solving functiona...
Definition: matrices.h:1271
int & face_index()
Index of the face (a number that uniquely identifies the face in the element)
Definition: elements.h:4630
FiniteElement *& bulk_element_pt()
Pointer to higher-dimensional "bulk" element.
Definition: elements.h:4739
FaceGeometry()
Constructor: Call the constructor for the appropriate lower-dimensional QElement.
//////////////////////////////////////////////////////////////////// ////////////////////////////////...
Definition: elements.h:5002
A general Finite Element class.
Definition: elements.h:1317
double nodal_value(const unsigned &n, const unsigned &i) const
Return the i-th value stored at local node n. Produces suitably interpolated values for hanging nodes...
Definition: elements.h:2597
virtual double dshape_eulerian_at_knot(const unsigned &ipt, Shape &psi, DShape &dpsidx) const
Return the geometric shape functions and also first derivatives w.r.t. global coordinates at the ipt-...
Definition: elements.cc:3355
virtual double interpolated_x(const Vector< double > &s, const unsigned &i) const
Return FE interpolated coordinate x[i] at local coordinate s.
Definition: elements.cc:3992
unsigned dim() const
Return the spatial dimension of the element, i.e. the number of local coordinates required to paramet...
Definition: elements.h:2615
unsigned nnode() const
Return the number of nodes.
Definition: elements.h:2214
Integral *const & integral_pt() const
Return the pointer to the integration scheme (const version)
Definition: elements.h:1967
double nodal_position(const unsigned &n, const unsigned &i) const
Return the i-th coordinate at local node n. If the node is hanging, the appropriate interpolation is ...
Definition: elements.h:2321
virtual void build_face_element(const int &face_index, FaceElement *face_element_pt)
Function for building a lower dimensional FaceElement on the specified face of the FiniteElement....
Definition: elements.cc:5162
unsigned nodal_dimension() const
Return the required Eulerian dimension of the nodes in this element.
Definition: elements.h:2488
void(* UnsteadyExactSolutionFctPt)(const double &, const Vector< double > &, Vector< double > &)
Function pointer for function that computes Vector-valued time-dependent function as .
Definition: elements.h:1769
Base class for the flux transport equations templated by the dimension DIM. The equations that are so...
virtual void fill_in_generic_residual_contribution_flux_transport(Vector< double > &residuals, DenseMatrix< double > &jacobian, DenseMatrix< double > &mass_matrix, unsigned flag)
Compute the residuals for the Navier–Stokes equations; flag=1(or 0): do (or don't) compute the Jacobi...
void calculate_element_averages(double *&average_values)
Compute the average values of the fluxes.
void output(std::ostream &outfile)
Output the element data — typically the values at the nodes in a format suitable for post-processing.
virtual unsigned nweight() const =0
Return the number of integration points of the scheme.
virtual double weight(const unsigned &i) const =0
Return weight of i-th integration point.
An OomphLibError object which should be thrown when an run-time error is encountered....
/////////////////////////////////////////////////////////////////////// /////////////////////////////...
Definition: elements.h:3443
/////////////////////////////////////////////////////////////////////// /////////////////////////////...
Definition: Qelements.h:459
Non-spectral version of the classes.
void output(std::ostream &outfile, const unsigned &n_plot)
Output function: x,y,u or x,y,z,u at n_plot^DIM plot points.
QScalarAdvectionElement(const QScalarAdvectionElement< DIM, NNODE_1D > &dummy)=delete
Broken copy constructor.
unsigned required_nvalue(const unsigned &n) const
Broken assignment operator.
double dshape_and_dtest_eulerian_flux_transport(const Vector< double > &s, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
Shape, test functions & derivs. w.r.t. to global coords. Return Jacobian.
double dshape_and_dtest_eulerian_at_knot_flux_transport(const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
Shape, test functions & derivs. w.r.t. to global coords. at integration point ipt....
QScalarAdvectionElement()
Constructor: Call constructors for QElement and Advection Diffusion equations.
void output(std::ostream &outfile)
Output function: x,y,u or x,y,z,u.
General QLegendreElement class.
void output(std::ostream &outfile, const unsigned &n_plot)
Output function: x,y,u or x,y,z,u at n_plot^DIM plot points.
QSpectralScalarAdvectionElement()
Constructor: Call constructors for QElement and Advection Diffusion equations.
double dshape_and_dtest_eulerian_flux_transport(const Vector< double > &s, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
Shape, test functions & derivs. w.r.t. to global coords. Return Jacobian.
unsigned required_nvalue(const unsigned &n) const
Broken assignment operator.
QSpectralScalarAdvectionElement(const QSpectralScalarAdvectionElement< DIM, NNODE_1D > &dummy)=delete
Broken copy constructor.
void output(std::ostream &outfile)
Output function: x,y,u or x,y,z,u.
double dshape_and_dtest_eulerian_at_knot_flux_transport(const unsigned &ipt, Shape &psi, DShape &dpsidx, Shape &test, DShape &dtestdx) const
Shape, test functions & derivs. w.r.t. to global coords. at integration point ipt....
////////////////////////////////////////////////////////////////// //////////////////////////////////...
Definition: matrices.h:1370
Base class for advection equations.
ScalarAdvectionWindFctPt Wind_fct_pt
Function pointer to the wind function.
unsigned required_nvalue(const unsigned &n) const
The number of unknowns at each node is the number of values.
ScalarAdvectionWindFctPt wind_fct_pt() const
Access function: Pointer to wind function. Const version.
ScalarAdvectionWindFctPt & wind_fct_pt()
Access function: Pointer to wind function.
unsigned nflux() const
A single flux is interpolated.
virtual void get_wind_scalar_adv(const unsigned &ipt, const Vector< double > &s, const Vector< double > &x, Vector< double > &wind) const
Return the wind at a given position.
void compute_error(std::ostream &outfile, FiniteElement::UnsteadyExactSolutionFctPt initial_condition_pt, const double &t, Vector< double > &error, Vector< double > &norm)
Compute the error and norm of solution integrated over the element Does not plot the error in the out...
void dflux_du(const Vector< double > &u, RankThreeTensor< double > &df_du)
Return the flux derivatives as a function of the unknowns.
void flux(const Vector< double > &u, DenseMatrix< double > &f)
Return the flux as a function of the unknown.
void(* ScalarAdvectionWindFctPt)(const Vector< double > &x, Vector< double > &wind)
Typedef for a wind function as a possible function of position.
A Class for shape functions. In simple cases, the shape functions have only one index that can be tho...
Definition: shape.h:76
double dot(const Vector< double > &a, const Vector< double > &b)
Probably not always best/fastest because not optimised for dimension but useful...
Definition: Vector.h:291
//////////////////////////////////////////////////////////////////// ////////////////////////////////...