quarter_tube_domain.h
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26 // Include guards
27 #ifndef OOMPH_QUARTER_TUBE_DOMAIN_HEADER
28 #define OOMPH_QUARTER_TUBE_DOMAIN_HEADER
29 
30 // Generic oomph-lib includes
31 #include "../generic/quadtree.h"
32 #include "../generic/domain.h"
33 #include "../generic/geom_objects.h"
34 
35 namespace oomph
36 {
37  //=================================================================
38  /// Quarter tube as domain. Domain is bounded by
39  /// curved boundary which is represented by a GeomObject. Domain is
40  /// parametrised by three macro elements in each of the nlayer slices
41  //=================================================================
42  class QuarterTubeDomain : public Domain
43  {
44  public:
45  /// Constructor: Pass boundary object and start and end coordinates
46  /// and fraction along boundary object where outer ring is divided.
47  /// We form nlayer axial slices.
48  QuarterTubeDomain(GeomObject* boundary_geom_object_pt,
49  const Vector<double>& xi_lo,
50  const double& fract_mid,
51  const Vector<double>& xi_hi,
52  const unsigned& nlayer)
53  : Xi_lo(xi_lo),
54  Fract_mid(fract_mid),
55  Xi_hi(xi_hi),
56  Nlayer(nlayer),
57  Wall_pt(boundary_geom_object_pt),
60  {
61  // There are three macro elements
62  unsigned nmacro = 3 * nlayer;
63 
64  // Resize
65  Macro_element_pt.resize(nmacro);
66 
67  // Create macro elements
68  for (unsigned i = 0; i < nmacro; i++)
69  {
70  Macro_element_pt[i] = new QMacroElement<3>(this, i);
71  }
72  }
73 
74  /// Broken copy constructor
76 
77  /// Broken assignment operator
78  void operator=(const QuarterTubeDomain&) = delete;
79 
80  /// Destructor: empty; cleanup done in base class
82 
83  /// Typedef for function pointer for function that squashes
84  /// the outer two macro elements towards
85  /// the wall by mapping the input value of the "radial" macro element
86  /// coordinate to the return value
87  typedef double (*BLSquashFctPt)(const double& s);
88 
89 
90  /// Function pointer for function that squashes
91  /// the outer two macro elements towards
92  /// the wall by mapping the input value of the "radial" macro element
93  /// coordinate to the return value
95  {
96  return BL_squash_fct_pt;
97  }
98 
99 
100  /// Function that squashes the outer two macro elements towards
101  /// the wall by mapping the input value of the "radial" macro element
102  /// coordinate to the return value.
103  double s_squashed(const double& s)
104  {
105  return BL_squash_fct_pt(s);
106  }
107 
108 
109  /// Typedef for function pointer for function that implements
110  /// axial spacing of macro elements
111  typedef double (*AxialSpacingFctPt)(const double& xi);
112 
113 
114  /// Function pointer for function that implements
115  /// axial spacing of macro elements
117  {
118  return Axial_spacing_fct_pt;
119  }
120 
121  /// Function that implements
122  /// axial spacing of macro elements
123  double axial_spacing_fct(const double& xi)
124  {
125  return Axial_spacing_fct_pt(xi);
126  }
127 
128 
129  /// Vector representation of the i_macro-th macro element
130  /// boundary i_direct (L/R/D/U/B/F) at time level t
131  /// (t=0: present; t>0: previous):
132  /// f(s).
133  void macro_element_boundary(const unsigned& t,
134  const unsigned& i_macro,
135  const unsigned& i_direct,
136  const Vector<double>& s,
137  Vector<double>& f);
138 
139  private:
140  /// Lower limit for the coordinates along the wall
142 
143  /// Fraction along wall where outer ring is to be divided
144  double Fract_mid;
145 
146  /// Upper limit for the coordinates along the wall
148 
149  /// Number of layers
150  unsigned Nlayer;
151 
152  /// Pointer to geometric object that represents the curved wall
154 
155 
156  /// Function pointer for function that squashes
157  /// the outer two macro elements towards
158  /// the wall by mapping the input value of the "radial" macro element
159  /// coordinate to the return value
161 
162 
163  /// Default for function that squashes
164  /// the outer two macro elements towards
165  /// the wall by mapping the input value of the "radial" macro element
166  /// coordinate to the return value: Identity.
167  static double default_BL_squash_fct(const double& s)
168  {
169  return s;
170  }
171 
172 
173  /// Function pointer for function that implements
174  /// axial spacing of macro elements
176 
177 
178  /// Default for function that implements
179  /// axial spacing of macro elements
180  static double default_axial_spacing_fct(const double& xi)
181  {
182  return xi;
183  }
184 
185 
186  /// Boundary of central box macro element in layer i_layer
187  /// zeta \f$ \in [-1,1]^2 \f$
188  void r_centr_L(const unsigned& t,
189  const Vector<double>& zeta,
190  const unsigned& i_layer,
191  Vector<double>& f);
192 
193  /// Boundary of central box macro element in layer i_layer
194  /// zeta \f$ \in [-1,1]^2 \f$
195  void r_centr_R(const unsigned& t,
196  const Vector<double>& zeta,
197  const unsigned& i_layer,
198  Vector<double>& f);
199 
200  /// Boundary of central box macro element in layer i_layer
201  /// zeta \f$ \in [-1,1]^2 \f$
202  void r_centr_D(const unsigned& t,
203  const Vector<double>& zeta,
204  const unsigned& i_layer,
205  Vector<double>& f);
206 
207  /// Boundary of central box macro element in layer i_layer
208  /// zeta \f$ \in [-1,1]^2 \f$
209  void r_centr_U(const unsigned& t,
210  const Vector<double>& zeta,
211  const unsigned& i_layer,
212  Vector<double>& f);
213 
214  /// Boundary of central box macro element in layer i_layer
215  /// zeta \f$ \in [-1,1]^2 \f$
216  void r_centr_B(const unsigned& t,
217  const Vector<double>& zeta,
218  const unsigned& i_layer,
219  Vector<double>& f);
220 
221  /// Boundary of central box macro element in layer i_layer
222  /// zeta \f$ \in [-1,1]^2 \f$
223  void r_centr_F(const unsigned& t,
224  const Vector<double>& zeta,
225  const unsigned& i_layer,
226  Vector<double>& f);
227 
228 
229  /// Boundary of bottom right box macro element in layer i_layer
230  /// zeta \f$ \in [-1,1]^2 \f$
231  void r_bot_right_L(const unsigned& t,
232  const Vector<double>& zeta,
233  const unsigned& i_layer,
234  Vector<double>& f);
235 
236  /// Boundary of bottom right box macro element in layer i_layer
237  /// zeta \f$ \in [-1,1]^2 \f$
238  void r_bot_right_R(const unsigned& t,
239  const Vector<double>& zeta,
240  const unsigned& i_layer,
241  Vector<double>& f);
242 
243  /// Boundary of bottom right box macro element in layer i_layer
244  /// zeta \f$ \in [-1,1]^2 \f$
245  void r_bot_right_D(const unsigned& t,
246  const Vector<double>& zeta,
247  const unsigned& i_layer,
248  Vector<double>& f);
249 
250  /// Boundary of bottom right box macro element in layer i_layer
251  /// zeta \f$ \in [-1,1]^2 \f$
252  void r_bot_right_U(const unsigned& t,
253  const Vector<double>& zeta,
254  const unsigned& i_layer,
255  Vector<double>& f);
256 
257  /// Boundary of bottom right box macro element in layer i_layer
258  /// zeta \f$ \in [-1,1]^2 \f$
259  void r_bot_right_B(const unsigned& t,
260  const Vector<double>& zeta,
261  const unsigned& i_layer,
262  Vector<double>& f);
263 
264  /// Boundary of bottom right box macro element in layer i_layer
265  /// zeta \f$ \in [-1,1]^2 \f$
266  void r_bot_right_F(const unsigned& t,
267  const Vector<double>& zeta,
268  const unsigned& i_layer,
269  Vector<double>& f);
270 
271 
272  /// Boundary of top left box macro element in layer i_layer
273  /// zeta \f$ \in [-1,1]^2 \f$
274  void r_top_left_L(const unsigned& t,
275  const Vector<double>& zeta,
276  const unsigned& i_layer,
277  Vector<double>& f);
278 
279  /// Boundary of top left box macro element in layer i_layer
280  /// zeta \f$ \in [-1,1]^2 \f$
281  void r_top_left_R(const unsigned& t,
282  const Vector<double>& zeta,
283  const unsigned& i_layer,
284  Vector<double>& f);
285 
286  /// Boundary of top left box macro element in layer i_layer
287  /// zeta \f$ \in [-1,1]^2 \f$
288  void r_top_left_D(const unsigned& t,
289  const Vector<double>& zeta,
290  const unsigned& i_layer,
291  Vector<double>& f);
292 
293  /// Boundary of top left box macro element in layer i_layer
294  /// zeta \f$ \in [-1,1]^2 \f$
295  void r_top_left_U(const unsigned& t,
296  const Vector<double>& zeta,
297  const unsigned& i_layer,
298  Vector<double>& f);
299 
300  /// Boundary of top left box macro element in layer i_layer
301  /// zeta \f$ \in [-1,1]^2 \f$
302  void r_top_left_B(const unsigned& t,
303  const Vector<double>& zeta,
304  const unsigned& i_layer,
305  Vector<double>& f);
306 
307  /// Boundary of top left box macro element in layer i_layer
308  /// zeta \f$ \in [-1,1]^2 \f$
309  void r_top_left_F(const unsigned& t,
310  const Vector<double>& zeta,
311  const unsigned& i_layer,
312  Vector<double>& f);
313  };
314 
315 
316  /// //////////////////////////////////////////////////////////////////////
317  /// //////////////////////////////////////////////////////////////////////
318  /// //////////////////////////////////////////////////////////////////////
319 
320 
321  //=================================================================
322  /// Vector representation of the imacro-th macro element
323  /// boundary idirect (L/R/D/U/B/F) at time level t
324  /// (t=0: present; t>0: previous): f(s)
325  //=================================================================
327  const unsigned& imacro,
328  const unsigned& idirect,
329  const Vector<double>& s,
330  Vector<double>& f)
331  {
332  using namespace OcTreeNames;
333 
334 #ifdef WARN_ABOUT_SUBTLY_CHANGED_OOMPH_INTERFACES
335  // Warn about time argument being moved to the front
337  "Order of function arguments has changed between versions 0.8 and 0.85",
338  "QuarterTubeDomain::macro_element_boundary(...)",
339  OOMPH_EXCEPTION_LOCATION);
340 #endif
341 
342 
343  unsigned ilayer = unsigned(imacro / 3);
344 
345  // Which macro element?
346  // --------------------
347  switch (imacro % 3)
348  {
349  // Macro element 0: Central box
350  case 0:
351 
352  // Which direction?
353  if (idirect == L)
354  {
355  r_centr_L(t, s, ilayer, f);
356  }
357  else if (idirect == R)
358  {
359  r_centr_R(t, s, ilayer, f);
360  }
361  else if (idirect == D)
362  {
363  r_centr_D(t, s, ilayer, f);
364  }
365  else if (idirect == U)
366  {
367  r_centr_U(t, s, ilayer, f);
368  }
369  else if (idirect == B)
370  {
371  r_centr_B(t, s, ilayer, f);
372  }
373  else if (idirect == F)
374  {
375  r_centr_F(t, s, ilayer, f);
376  }
377  else
378  {
379  std::ostringstream error_stream;
380  error_stream << "idirect is " << idirect
381  << " not one of L, R, D, U, B, F" << std::endl;
382 
383  throw OomphLibError(error_stream.str(),
384  OOMPH_CURRENT_FUNCTION,
385  OOMPH_EXCEPTION_LOCATION);
386  }
387 
388  break;
389 
390 
391  // Macro element 1: Bottom right
392  case 1:
393 
394  // Which direction?
395  if (idirect == L)
396  {
397  r_bot_right_L(t, s, ilayer, f);
398  }
399  else if (idirect == R)
400  {
401  r_bot_right_R(t, s, ilayer, f);
402  }
403  else if (idirect == D)
404  {
405  r_bot_right_D(t, s, ilayer, f);
406  }
407  else if (idirect == U)
408  {
409  r_bot_right_U(t, s, ilayer, f);
410  }
411  else if (idirect == B)
412  {
413  r_bot_right_B(t, s, ilayer, f);
414  }
415  else if (idirect == F)
416  {
417  r_bot_right_F(t, s, ilayer, f);
418  }
419  else
420  {
421  std::ostringstream error_stream;
422  error_stream << "idirect is " << idirect
423  << " not one of L, R, D, U, B, F" << std::endl;
424 
425  throw OomphLibError(error_stream.str(),
426  OOMPH_CURRENT_FUNCTION,
427  OOMPH_EXCEPTION_LOCATION);
428  }
429 
430 
431  break;
432 
433  // Macro element 2:Top left
434  case 2:
435 
436  // Which direction?
437  if (idirect == L)
438  {
439  r_top_left_L(t, s, ilayer, f);
440  }
441  else if (idirect == R)
442  {
443  r_top_left_R(t, s, ilayer, f);
444  }
445  else if (idirect == D)
446  {
447  r_top_left_D(t, s, ilayer, f);
448  }
449  else if (idirect == U)
450  {
451  r_top_left_U(t, s, ilayer, f);
452  }
453  else if (idirect == B)
454  {
455  r_top_left_B(t, s, ilayer, f);
456  }
457  else if (idirect == F)
458  {
459  r_top_left_F(t, s, ilayer, f);
460  }
461  else
462  {
463  std::ostringstream error_stream;
464  error_stream << "idirect is " << idirect
465  << " not one of L, R, D, U, B, F" << std::endl;
466 
467  throw OomphLibError(error_stream.str(),
468  OOMPH_CURRENT_FUNCTION,
469  OOMPH_EXCEPTION_LOCATION);
470  }
471 
472  break;
473 
474  default:
475 
476  // Error
477  std::ostringstream error_stream;
478  error_stream << "Wrong imacro " << imacro << std::endl;
479  throw OomphLibError(
480  error_stream.str(), OOMPH_CURRENT_FUNCTION, OOMPH_EXCEPTION_LOCATION);
481  }
482  }
483 
484 
485  //=======================================================================
486  /// Boundary of central box macro element in layer i_layer
487  /// zeta \f$ \in [-1,1]^2 \f$
488  //=======================================================================
489  void QuarterTubeDomain::r_centr_L(const unsigned& t,
490  const Vector<double>& zeta,
491  const unsigned& i_layer,
492  Vector<double>& f)
493  {
494  // Wall coordinates along top edge of wall
495  Vector<double> x(2);
496  x[0] =
497  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
498  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
499  double(Nlayer));
500  x[1] = Xi_hi[1];
501 
502  // Get position vector to upper edge of wall
503  Vector<double> r_top(3);
504  Wall_pt->position(t, x, r_top);
505 
506  // Scale it down to half the height
507  f[0] = r_top[0];
508  f[1] = r_top[1] * 0.25 * (1.0 + zeta[0]);
509  // Warp it:
510  double rho = 0.0; // 0.25*(1.0+zeta[0]);
511  f[2] = x[0] + rho * (r_top[2] - x[0]);
512 
513  // f[2]=r_top[2];
514  }
515 
516 
517  //=======================================================================
518  /// Boundary of central box macro element in layer i_layer
519  /// zeta \f$ \in [-1,1]^2 \f$
520  //=======================================================================
521  void QuarterTubeDomain::r_centr_R(const unsigned& t,
522  const Vector<double>& zeta,
523  const unsigned& i_layer,
524  Vector<double>& f)
525  {
526  // Note the repetition in the calculation, there is some scope
527  // for optimisation
528 
529  // Wall coordinates along top edge of wall
530  Vector<double> x(2);
531  x[0] =
532  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
533  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
534  double(Nlayer));
535  x[1] = Xi_hi[1];
536 
537  // Get position vector to upper edge of wall
538  Vector<double> r_top(3);
539  Wall_pt->position(t, x, r_top);
540 
541  // Wall coordinates along bottom edge of wall
542  x[0] =
543  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
544  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
545  double(Nlayer));
546  x[1] = Xi_lo[1];
547 
548  // Get position vector to bottom edge of wall
549  Vector<double> r_bottom(3);
550  Wall_pt->position(t, x, r_bottom);
551 
552  // Scale it down to half the height, halfway across width
553  f[0] = 0.5 * r_bottom[0];
554  f[1] = r_top[1] * 0.25 * (1.0 + zeta[0]);
555 
556  // Warp it:
557  double rho = 0.0; // 0.25*(1.0+zeta[0]);
558  f[2] = x[0] + rho * (r_top[2] - x[0]);
559  // f[2]=r_top[2];
560  }
561 
562 
563  //=======================================================================
564  /// Boundary of central box macro element in layer i_layer
565  /// zeta \f$ \in [-1,1]^2 \f$
566  //=======================================================================
567  void QuarterTubeDomain::r_centr_D(const unsigned& t,
568  const Vector<double>& zeta,
569  const unsigned& i_layer,
570  Vector<double>& f)
571  {
572  // Wall coordinates along bottom edge of wall
573  Vector<double> x(2);
574  x[0] =
575  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
576  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
577  double(Nlayer));
578  x[1] = Xi_lo[1];
579 
580  // Get position vector to bottom edge of wall
581  Vector<double> r_bottom(3);
582  Wall_pt->position(t, x, r_bottom);
583 
584  // Scale it down to half the width
585  f[0] = r_bottom[0] * 0.25 * (1.0 + zeta[0]);
586  f[1] = r_bottom[1];
587 
588  // Warp it:
589  double rho = 0.0; // 0.25*(1.0+zeta[0]);
590  f[2] = x[0] + rho * (r_bottom[2] - x[0]);
591  // f[2]=r_bottom[2];
592  }
593 
594 
595  //=======================================================================
596  /// Boundary of central box macro element in layer i_layer
597  /// zeta \f$ \in [-1,1]^2 \f$
598  //=======================================================================
599  void QuarterTubeDomain::r_centr_U(const unsigned& t,
600  const Vector<double>& zeta,
601  const unsigned& i_layer,
602  Vector<double>& f)
603  {
604  // Wall coordinates along top edge of wall
605  Vector<double> x(2);
606  x[0] =
607  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
608  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
609  double(Nlayer));
610  x[1] = Xi_hi[1];
611 
612  // Get position vector to upper edge of wall
613  Vector<double> r_top(3);
614  Wall_pt->position(t, x, r_top);
615 
616  // Wall coordinates along bottom edge of wall
617  x[0] =
618  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
619  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
620  double(Nlayer));
621  x[1] = Xi_lo[1];
622 
623  // Get position vector to bottom edge of wall
624  Vector<double> r_bottom(3);
625  Wall_pt->position(t, x, r_bottom);
626 
627  // Scale it down to half the width
628  f[0] = r_bottom[0] * 0.25 * (1.0 + zeta[0]);
629  f[1] = 0.5 * r_top[1];
630 
631  // Warp it:
632  double rho = 0.0; // 0.25*(1.0+zeta[0]);
633  f[2] = x[0] + rho * (r_bottom[2] - x[0]);
634  // f[2]=r_bottom[2];
635  }
636 
637 
638  //=======================================================================
639  /// Boundary of central box macro element in layer i_layer
640  /// zeta \f$ \in [-1,1]^2 \f$
641  //=======================================================================
642  void QuarterTubeDomain::r_centr_B(const unsigned& t,
643  const Vector<double>& zeta,
644  const unsigned& i_layer,
645  Vector<double>& f)
646  {
647  // Wall coordinates along bottom edge of wall
648  Vector<double> x(2);
649  x[0] = Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
650  axial_spacing_fct(double(i_layer) / double(Nlayer));
651  x[1] = Xi_lo[1];
652 
653  // Get position vector to bottom edge of wall
654  Vector<double> r_bottom(3);
655  Wall_pt->position(t, x, r_bottom);
656 
657 
658  // Wall coordinates along top edge of wall
659  x[0] = Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
660  axial_spacing_fct(double(i_layer) / double(Nlayer));
661  x[1] = Xi_hi[1];
662 
663  // Get position vector to top edge of wall
664  Vector<double> r_top(3);
665  Wall_pt->position(t, x, r_top);
666 
667  // Map it
668  f[0] = r_bottom[0] * 0.25 * (1.0 + zeta[0]);
669  f[1] = r_top[1] * 0.25 * (1.0 + zeta[1]);
670 
671  // Warp it:
672  double rho = 0.0; // 0.25*(1.0+zeta[1]);
673  f[2] = x[0] + rho * (r_top[2] - x[0]);
674  // f[2]=r_top[2];
675  }
676 
677 
678  //=======================================================================
679  /// Boundary of central box macro element in layer i_layer
680  /// zeta \f$ \in [-1,1]^2 \f$
681  //=======================================================================
682  void QuarterTubeDomain::r_centr_F(const unsigned& t,
683  const Vector<double>& zeta,
684  const unsigned& i_layer,
685  Vector<double>& f)
686  {
687  // Wall coordinates along bottom edge of wall
688  Vector<double> x(2);
689  x[0] = Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
690  axial_spacing_fct(double(1 + i_layer) / double(Nlayer));
691  x[1] = Xi_lo[1];
692 
693  // Get position vector to bottom edge of wall
694  Vector<double> r_bottom(3);
695  Wall_pt->position(t, x, r_bottom);
696 
697 
698  // Wall coordinates along top edge of wall
699  x[0] = Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
700  axial_spacing_fct(double(1 + i_layer) / double(Nlayer));
701  x[1] = Xi_hi[1];
702 
703  // Get position vector to top edge of wall
704  Vector<double> r_top(3);
705  Wall_pt->position(t, x, r_top);
706 
707  // Map it
708  f[0] = r_bottom[0] * 0.25 * (1.0 + zeta[0]);
709  f[1] = r_top[1] * 0.25 * (1.0 + zeta[1]);
710 
711  // Warp it:
712  double rho = 0.0; // 0.25*(1.0+zeta[1]);
713  f[2] = x[0] + rho * (r_top[2] - x[0]);
714  // f[2]=r_top[2];
715  }
716 
717 
718  //#####################################################################
719 
720 
721  //=======================================================================
722  /// Boundary of bottom right box macro element in layer i_layer
723  /// zeta \f$ \in [-1,1]^2 \f$
724  //=======================================================================
725  void QuarterTubeDomain::r_bot_right_L(const unsigned& t,
726  const Vector<double>& zeta,
727  const unsigned& i_layer,
728  Vector<double>& f)
729  {
730  r_centr_R(t, zeta, i_layer, f);
731  }
732 
733 
734  //=======================================================================
735  /// Boundary of bottom right box macro element in layer i_layer
736  /// zeta \f$ \in [-1,1]^2 \f$
737  //=======================================================================
738  void QuarterTubeDomain::r_bot_right_R(const unsigned& t,
739  const Vector<double>& zeta,
740  const unsigned& i_layer,
741  Vector<double>& f)
742  {
743  // Wall coordinates
744  Vector<double> x(2);
745  x[0] =
746  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
747  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
748  double(Nlayer));
749  x[1] = Xi_lo[1] + Fract_mid * (Xi_hi[1] - Xi_lo[1]) * 0.5 * (1.0 + zeta[0]);
750 
751  // Get position vector on wall
752  Wall_pt->position(t, x, f);
753  }
754 
755 
756  //=======================================================================
757  /// Boundary of bottom right box macro element in layer i_layer
758  /// zeta \f$ \in [-1,1]^2 \f$
759  //=======================================================================
760  void QuarterTubeDomain::r_bot_right_D(const unsigned& t,
761  const Vector<double>& zeta,
762  const unsigned& i_layer,
763  Vector<double>& f)
764  {
765  // Wall coordinates along bottom edge of wall
766  Vector<double> x(2);
767  x[0] =
768  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
769  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
770  double(Nlayer));
771  x[1] = Xi_lo[1];
772 
773  // Get position vector to bottom edge of wall
774  Vector<double> r_bottom(3);
775  Wall_pt->position(t, x, r_bottom);
776 
777  // Scale it down to half the width
778  f[0] = 0.5 * r_bottom[0] * (1.0 + s_squashed(0.5 * (1.0 + zeta[0])));
779  f[1] = r_bottom[1];
780 
781  // Warp it:
782  double rho = s_squashed(0.5 * (1.0 + zeta[0]));
783  f[2] = x[0] + rho * (r_bottom[2] - x[0]);
784  // f[2]=r_bottom[2];
785  }
786 
787 
788  //=======================================================================
789  /// Boundary of bottom right box macro element in layer i_layer
790  /// zeta \f$ \in [-1,1]^2 \f$
791  //=======================================================================
792  void QuarterTubeDomain::r_bot_right_U(const unsigned& t,
793  const Vector<double>& zeta,
794  const unsigned& i_layer,
795  Vector<double>& f)
796  {
797  // Wall coordinates of dividing line
798  Vector<double> x(2);
799  x[0] =
800  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
801  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
802  double(Nlayer));
803  x[1] = Xi_lo[1] + Fract_mid * (Xi_hi[1] - Xi_lo[1]);
804 
805  // Get position vector on dividing line
806  Vector<double> r_div(3);
807  Wall_pt->position(t, x, r_div);
808 
809 
810  // Position vector to corner of central box
811  Vector<double> zeta_central(2);
812  Vector<double> r_central(3);
813  zeta_central[0] = 1.0;
814  zeta_central[1] = zeta[1];
815  r_centr_R(t, zeta_central, i_layer, r_central);
816 
817 
818  // Straight line across
819  f[0] = r_central[0] +
820  (r_div[0] - r_central[0]) * s_squashed(0.5 * (1.0 + zeta[0]));
821  f[1] = r_central[1] +
822  (r_div[1] - r_central[1]) * s_squashed(0.5 * (1.0 + zeta[0]));
823  f[2] = r_central[2] +
824  (r_div[2] - r_central[2]) * s_squashed(0.5 * (1.0 + zeta[0]));
825  }
826 
827 
828  //=======================================================================
829  /// Boundary of bottom right box macro element in layer i_layer
830  /// zeta \f$ \in [-1,1]^2 \f$
831  //=======================================================================
832  void QuarterTubeDomain::r_bot_right_B(const unsigned& t,
833  const Vector<double>& zeta,
834  const unsigned& i_layer,
835  Vector<double>& f)
836  {
837  // Wall coordinates
838  Vector<double> x(2);
839  x[0] = Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
840  axial_spacing_fct(double(i_layer) / double(Nlayer));
841  x[1] = Xi_lo[1] + Fract_mid * (Xi_hi[1] - Xi_lo[1]) * 0.5 * (1.0 + zeta[1]);
842 
843  // Get position vector to wall
844  Vector<double> r_wall(3);
845  Wall_pt->position(t, x, r_wall);
846 
847  // Get position vector on central box
848  Vector<double> zeta_central(2);
849  Vector<double> r_central(3);
850  zeta_central[0] = zeta[1];
851  zeta_central[1] = -1.0;
852  r_centr_R(t, zeta_central, i_layer, r_central);
853 
854 
855  // Straight line across
856  f[0] = r_central[0] +
857  (r_wall[0] - r_central[0]) * s_squashed(0.5 * (1.0 + zeta[0]));
858  f[1] = r_central[1] +
859  (r_wall[1] - r_central[1]) * s_squashed(0.5 * (1.0 + zeta[0]));
860  f[2] = r_central[2] +
861  (r_wall[2] - r_central[2]) * s_squashed(0.5 * (1.0 + zeta[0]));
862  }
863 
864 
865  //=======================================================================
866  /// Boundary of bottom right box macro element in layer i_layer
867  /// zeta \f$ \in [-1,1]^2 \f$
868  //=======================================================================
869  void QuarterTubeDomain::r_bot_right_F(const unsigned& t,
870  const Vector<double>& zeta,
871  const unsigned& i_layer,
872  Vector<double>& f)
873  {
874  // Wall coordinates
875  Vector<double> x(2);
876  x[0] = Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
877  axial_spacing_fct(double(1 + i_layer) / double(Nlayer));
878  x[1] = Xi_lo[1] + Fract_mid * (Xi_hi[1] - Xi_lo[1]) * 0.5 * (1.0 + zeta[1]);
879 
880  // Get position vector to wall
881  Vector<double> r_wall(3);
882  Wall_pt->position(t, x, r_wall);
883 
884  // Get position vector on central box
885  Vector<double> zeta_central(2);
886  Vector<double> r_central(3);
887  zeta_central[0] = zeta[1];
888  zeta_central[1] = 1.0;
889  r_centr_R(t, zeta_central, i_layer, r_central);
890 
891 
892  // Straight line across
893  f[0] = r_central[0] +
894  (r_wall[0] - r_central[0]) * s_squashed(0.5 * (1.0 + zeta[0]));
895  f[1] = r_central[1] +
896  (r_wall[1] - r_central[1]) * s_squashed(0.5 * (1.0 + zeta[0]));
897  f[2] = r_central[2] +
898  (r_wall[2] - r_central[2]) * s_squashed(0.5 * (1.0 + zeta[0]));
899  }
900 
901 
902  //#####################################################################
903 
904 
905  //=======================================================================
906  /// Boundary of top left box macro element in layer i_layer
907  /// zeta \f$ \in [-1,1]^2 \f$
908  //=======================================================================
909  void QuarterTubeDomain::r_top_left_L(const unsigned& t,
910  const Vector<double>& zeta,
911  const unsigned& i_layer,
912  Vector<double>& f)
913  {
914  // Wall coordinates along top edge of wall
915  Vector<double> x(2);
916  x[0] =
917  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
918  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
919  double(Nlayer));
920  x[1] = Xi_hi[1];
921 
922  // Get position vector to upper edge of wall
923  Vector<double> r_top(3);
924  Wall_pt->position(t, x, r_top);
925 
926  // Scale it down to half the height
927  f[0] = r_top[0];
928  f[1] = 0.5 * r_top[1] * (1.0 + s_squashed(0.5 * (1.0 + zeta[0])));
929 
930  // Warp it:
931  double rho = s_squashed(0.5 * (1.0 + zeta[0]));
932  f[2] = x[0] + rho * (r_top[2] - x[0]);
933  // f[2]=r_top[2];
934  }
935 
936 
937  //=======================================================================
938  /// Boundary of top left box macro element in layer i_layer
939  /// zeta \f$ \in [-1,1]^2 \f$
940  //=======================================================================
941  void QuarterTubeDomain::r_top_left_R(const unsigned& t,
942  const Vector<double>& zeta,
943  const unsigned& i_layer,
944  Vector<double>& f)
945  {
946  // Swap coordinates
947  Vector<double> zeta_br(2);
948  zeta_br[0] = zeta[0];
949  zeta_br[1] = zeta[1];
950  r_bot_right_U(t, zeta_br, i_layer, f);
951  }
952 
953 
954  //=======================================================================
955  /// Boundary of top left box macro element in layer i_layer
956  /// zeta \f$ \in [-1,1]^2 \f$
957  //=======================================================================
958  void QuarterTubeDomain::r_top_left_D(const unsigned& t,
959  const Vector<double>& zeta,
960  const unsigned& i_layer,
961  Vector<double>& f)
962  {
963  r_centr_U(t, zeta, i_layer, f);
964  }
965 
966 
967  //=======================================================================
968  /// Boundary of top left box macro element in layer i_layer
969  /// zeta \f$ \in [-1,1]^2 \f$
970  //=======================================================================
971  void QuarterTubeDomain::r_top_left_U(const unsigned& t,
972  const Vector<double>& zeta,
973  const unsigned& i_layer,
974  Vector<double>& f)
975  {
976  // Wall coordinates
977  Vector<double> x(2);
978  x[0] =
979  Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
980  axial_spacing_fct((0.5 * (1.0 + zeta[1]) + double(i_layer)) /
981  double(Nlayer));
982  x[1] = Xi_hi[1] +
983  (Xi_lo[1] - Xi_hi[1]) * (1 - Fract_mid) * 0.5 * (1.0 + zeta[0]);
984 
985  // Get position vector on wall
986  Wall_pt->position(t, x, f);
987  }
988 
989 
990  //=======================================================================
991  /// Boundary of top left box macro element in layer i_layer
992  /// zeta \f$ \in [-1,1]^2 \f$
993  //=======================================================================
994  void QuarterTubeDomain::r_top_left_B(const unsigned& t,
995  const Vector<double>& zeta,
996  const unsigned& i_layer,
997  Vector<double>& f)
998  {
999  // Wall coordinates
1000  Vector<double> x(2);
1001  x[0] = Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
1002  axial_spacing_fct(double(i_layer) / double(Nlayer));
1003  x[1] = Xi_hi[1] +
1004  (Xi_lo[1] - Xi_hi[1]) * (1.0 - Fract_mid) * 0.5 * (1.0 + zeta[0]);
1005 
1006 
1007  // Get position vector to wall
1008  Vector<double> r_wall(3);
1009  Wall_pt->position(t, x, r_wall);
1010 
1011 
1012  // Get position vector on central box
1013  Vector<double> zeta_central(2);
1014  Vector<double> r_central(3);
1015  zeta_central[0] = zeta[0];
1016  zeta_central[1] = -1.0;
1017  r_centr_U(t, zeta_central, i_layer, r_central);
1018 
1019  // Straight line across
1020  f[0] = r_central[0] +
1021  (r_wall[0] - r_central[0]) * s_squashed(0.5 * (1.0 + zeta[1]));
1022  f[1] = r_central[1] +
1023  (r_wall[1] - r_central[1]) * s_squashed(0.5 * (1.0 + zeta[1]));
1024  f[2] = r_central[2] +
1025  (r_wall[2] - r_central[2]) * s_squashed(0.5 * (1.0 + zeta[1]));
1026  }
1027 
1028 
1029  //=======================================================================
1030  /// Boundary of top left box macro element in layer i_layer
1031  /// zeta \f$ \in [-1,1]^2 \f$
1032  //=======================================================================
1033  void QuarterTubeDomain::r_top_left_F(const unsigned& t,
1034  const Vector<double>& zeta,
1035  const unsigned& i_layer,
1036  Vector<double>& f)
1037  {
1038  // Wall coordinates
1039  Vector<double> x(2);
1040  x[0] = Xi_lo[0] + (Xi_hi[0] - Xi_lo[0]) *
1041  axial_spacing_fct(double(1 + i_layer) / double(Nlayer));
1042  x[1] = Xi_hi[1] +
1043  (Xi_lo[1] - Xi_hi[1]) * (1.0 - Fract_mid) * 0.5 * (1.0 + zeta[0]);
1044 
1045 
1046  // Get position vector to wall
1047  Vector<double> r_wall(3);
1048  Wall_pt->position(t, x, r_wall);
1049 
1050 
1051  // Get position vector on central box
1052  Vector<double> zeta_central(2);
1053  Vector<double> r_central(3);
1054  zeta_central[0] = zeta[0];
1055  zeta_central[1] = 1.0;
1056  r_centr_U(t, zeta_central, i_layer, r_central);
1057 
1058  // Straight line across
1059  f[0] = r_central[0] +
1060  (r_wall[0] - r_central[0]) * s_squashed(0.5 * (1.0 + zeta[1]));
1061  f[1] = r_central[1] +
1062  (r_wall[1] - r_central[1]) * s_squashed(0.5 * (1.0 + zeta[1]));
1063  f[2] = r_central[2] +
1064  (r_wall[2] - r_central[2]) * s_squashed(0.5 * (1.0 + zeta[1]));
1065  }
1066 
1067 
1068 } // namespace oomph
1069 
1070 #endif
static char t char * s
Definition: cfortran.h:568
cstr elem_len * i
Definition: cfortran.h:603
char t
Definition: cfortran.h:568
Base class for Domains with curvilinear and/or time-dependent boundaries. Domain boundaries are typic...
Definition: domain.h:67
Vector< MacroElement * > Macro_element_pt
Vector of pointers to macro elements.
Definition: domain.h:301
/////////////////////////////////////////////////////////////////////
Definition: geom_objects.h:101
virtual void position(const Vector< double > &zeta, Vector< double > &r) const =0
Parametrised position on object at current time: r(zeta).
An OomphLibError object which should be thrown when an run-time error is encountered....
An OomphLibWarning object which should be created as a temporary object to issue a warning....
QMacroElement specialised to 3 spatial dimensions.
Quarter tube as domain. Domain is bounded by curved boundary which is represented by a GeomObject....
QuarterTubeDomain(const QuarterTubeDomain &)=delete
Broken copy constructor.
AxialSpacingFctPt & axial_spacing_fct_pt()
Function pointer for function that implements axial spacing of macro elements.
void r_top_left_D(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of top left box macro element in layer i_layer zeta .
BLSquashFctPt & bl_squash_fct_pt()
Function pointer for function that squashes the outer two macro elements towards the wall by mapping ...
void r_top_left_L(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of top left box macro element in layer i_layer zeta .
~QuarterTubeDomain()
Destructor: empty; cleanup done in base class.
void r_top_left_R(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of top left box macro element in layer i_layer zeta .
void r_bot_right_L(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of bottom right box macro element in layer i_layer zeta .
BLSquashFctPt BL_squash_fct_pt
Function pointer for function that squashes the outer two macro elements towards the wall by mapping ...
void r_centr_B(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of central box macro element in layer i_layer zeta .
double axial_spacing_fct(const double &xi)
Function that implements axial spacing of macro elements.
double(* BLSquashFctPt)(const double &s)
Typedef for function pointer for function that squashes the outer two macro elements towards the wall...
static double default_BL_squash_fct(const double &s)
Default for function that squashes the outer two macro elements towards the wall by mapping the input...
void r_centr_D(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of central box macro element in layer i_layer zeta .
QuarterTubeDomain(GeomObject *boundary_geom_object_pt, const Vector< double > &xi_lo, const double &fract_mid, const Vector< double > &xi_hi, const unsigned &nlayer)
Constructor: Pass boundary object and start and end coordinates and fraction along boundary object wh...
Vector< double > Xi_lo
Lower limit for the coordinates along the wall.
unsigned Nlayer
Number of layers.
double s_squashed(const double &s)
Function that squashes the outer two macro elements towards the wall by mapping the input value of th...
void r_bot_right_F(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of bottom right box macro element in layer i_layer zeta .
void r_bot_right_D(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of bottom right box macro element in layer i_layer zeta .
void r_bot_right_U(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of bottom right box macro element in layer i_layer zeta .
Vector< double > Xi_hi
Upper limit for the coordinates along the wall.
void r_top_left_B(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of top left box macro element in layer i_layer zeta .
void r_top_left_U(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of top left box macro element in layer i_layer zeta .
void r_bot_right_R(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of bottom right box macro element in layer i_layer zeta .
void r_centr_F(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of central box macro element in layer i_layer zeta .
AxialSpacingFctPt Axial_spacing_fct_pt
Function pointer for function that implements axial spacing of macro elements.
void r_centr_L(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of central box macro element in layer i_layer zeta .
void operator=(const QuarterTubeDomain &)=delete
Broken assignment operator.
double(* AxialSpacingFctPt)(const double &xi)
Typedef for function pointer for function that implements axial spacing of macro elements.
static double default_axial_spacing_fct(const double &xi)
Default for function that implements axial spacing of macro elements.
void r_centr_R(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of central box macro element in layer i_layer zeta .
double Fract_mid
Fraction along wall where outer ring is to be divided.
void r_top_left_F(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of top left box macro element in layer i_layer zeta .
void r_bot_right_B(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of bottom right box macro element in layer i_layer zeta .
GeomObject * Wall_pt
Pointer to geometric object that represents the curved wall.
void macro_element_boundary(const unsigned &t, const unsigned &i_macro, const unsigned &i_direct, const Vector< double > &s, Vector< double > &f)
Vector representation of the i_macro-th macro element boundary i_direct (L/R/D/U/B/F) at time level t...
void r_centr_U(const unsigned &t, const Vector< double > &zeta, const unsigned &i_layer, Vector< double > &f)
Boundary of central box macro element in layer i_layer zeta .
//////////////////////////////////////////////////////////////////// ////////////////////////////////...