hermite_elements.cc
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26 // Non-inline functions for the QHermiteElement classes
27 
28 // oomph-lib header
29 #include "hermite_elements.h"
31 
32 namespace oomph
33 {
34  /// /////////////////////////////////////////////////////////////
35  // 1D Hermite elements
36  /// /////////////////////////////////////////////////////////////
37 
38  //=======================================================================
39  /// Assign the static Default_integration_scheme
40  //=======================================================================
41  template<unsigned DIM>
43 
44  //=======================================================================
45  /// Shape function for specific QHermiteElement<1>
46  //=======================================================================
47  template<>
49  {
50  // Local storage
51  double Psi[2][2];
52  // Call the OneDimensional Shape functions
53  OneDimHermite::shape(s[0], Psi);
54 
55  // Loop over the number of nodes
56  for (unsigned l = 0; l < 2; l++)
57  {
58  // Loop over the number of dofs
59  for (unsigned k = 0; k < 2; k++)
60  {
61  psi(l, k) = Psi[l][k];
62  }
63  }
64  }
65 
66  //=======================================================================
67  /// Derivatives of shape functions for specific QHermiteElement<1>
68  //=======================================================================
69  template<>
71  Shape& psi,
72  DShape& dpsids) const
73  {
74  // Local storage
75  double Psi[2][2], DPsi[2][2];
76  // Call the OneDimensional Shape functions
77  OneDimHermite::shape(s[0], Psi);
78  OneDimHermite::dshape(s[0], DPsi);
79 
80  // Loop over number of nodes
81  for (unsigned l = 0; l < 2; l++)
82  {
83  // Loop over number of dofs
84  for (unsigned k = 0; k < 2; k++)
85  {
86  psi(l, k) = Psi[l][k];
87  dpsids(l, k, 0) = DPsi[l][k];
88  }
89  }
90  }
91 
92  //=======================================================================
93  /// Derivatives and second derivatives of shape functions for specific
94  /// QHermiteElement<1>
95  /// d2psids(i,0) = \f$ d^2 \psi_j / d s^2 \f$
96  //=======================================================================
97  template<>
99  Shape& psi,
100  DShape& dpsids,
101  DShape& d2psids) const
102  {
103  // Local storage
104  double Psi[2][2], DPsi[2][2], D2Psi[2][2];
105  // Call the OneDimensional Shape functions
106  OneDimHermite::shape(s[0], Psi);
107  OneDimHermite::dshape(s[0], DPsi);
108  OneDimHermite::d2shape(s[0], D2Psi);
109 
110  // Loop over number of nodes
111  for (unsigned l = 0; l < 2; l++)
112  {
113  // Loop over number of dofs
114  for (unsigned k = 0; k < 2; k++)
115  {
116  psi(l, k) = Psi[l][k];
117  dpsids(l, k, 0) = DPsi[l][k];
118  d2psids(l, k, 0) = D2Psi[l][k];
119  }
120  }
121  }
122 
123 
124  //=======================================================================
125  /// The output function for general 1D QHermiteElements
126  //=======================================================================
127  template<>
128  void QHermiteElement<1>::output(std::ostream& outfile)
129  {
130  // Tecplot header info
131  outfile << "ZONE I=" << 2 << std::endl;
132 
133  // Find the dimension of the node
134  unsigned n_dim = this->nodal_dimension();
135 
136  // Loop over element nodes
137  for (unsigned l = 0; l < 2; l++)
138  {
139  // Loop over the dimensions and output the position
140  for (unsigned i = 0; i < n_dim; i++)
141  {
142  outfile << node_pt(l)->x(i) << " ";
143  }
144 
145  // Find the number of types of dof stored at each node
146  unsigned n_position_type = node_pt(l)->nposition_type();
147  // Loop over the additional positional dofs
148  for (unsigned k = 1; k < n_position_type; k++)
149  {
150  for (unsigned i = 0; i < n_dim; i++)
151  {
152  outfile << node_pt(l)->x_gen(k, i) << " ";
153  }
154  }
155 
156  // Find out how many data values at the node
157  unsigned initial_nvalue = node_pt(l)->nvalue();
158  // Lopp over the data and output whether pinned or not
159  for (unsigned i = 0; i < initial_nvalue; i++)
160  {
161  outfile << node_pt(l)->is_pinned(i) << " ";
162  }
163  outfile << std::endl;
164  }
165  outfile << std::endl;
166  }
167 
168  //=======================================================================
169  /// The output function for n_plot points in each coordinate direction
170  //=======================================================================
171  template<>
172  void QHermiteElement<1>::output(std::ostream& outfile, const unsigned& n_plot)
173  {
174  // Local variables
175  Vector<double> s(1);
176 
177  // Tecplot header info
178  outfile << "ZONE I=" << n_plot << std::endl;
179 
180  // Find the dimension of the first node
181  unsigned n_dim = this->nodal_dimension();
182 
183  // Loop over plot points
184  for (unsigned l = 0; l < n_plot; l++)
185  {
186  s[0] = -1.0 + l * 2.0 / (n_plot - 1);
187 
188  // Output the coordinates
189  for (unsigned i = 0; i < n_dim; i++)
190  {
191  outfile << interpolated_x(s, i) << " ";
192  }
193  outfile << std::endl;
194  }
195  outfile << std::endl;
196  }
197 
198 
199  //=======================================================================
200  /// The C-style output function for general 1D QHermiteElements
201  //=======================================================================
202  template<>
203  void QHermiteElement<1>::output(FILE* file_pt)
204  {
205  // Tecplot header info
206  fprintf(file_pt, "ZONE I=2\n");
207 
208  // Find the dimension of the nodes
209  unsigned n_dim = this->nodal_dimension();
210 
211  // Loop over element nodes
212  for (unsigned l = 0; l < 2; l++)
213  {
214  // Loop over the dimensions and output the position
215  for (unsigned i = 0; i < n_dim; i++)
216  {
217  fprintf(file_pt, "%g ", node_pt(l)->x(i));
218  }
219 
220  // Find the number of types of dof stored at each node
221  unsigned n_position_type = node_pt(l)->nposition_type();
222  // Loop over the additional positional dofs
223  for (unsigned k = 1; k < n_position_type; k++)
224  {
225  for (unsigned i = 0; i < n_dim; i++)
226  {
227  fprintf(file_pt, "%g ", node_pt(l)->x_gen(k, i));
228  }
229  }
230 
231  // Find out how many data values at the node
232  unsigned initial_nvalue = node_pt(l)->nvalue();
233  // Lopp over the data and output whether pinned or not
234  for (unsigned i = 0; i < initial_nvalue; i++)
235  {
236  fprintf(file_pt, "%i ", node_pt(l)->is_pinned(i));
237  }
238  fprintf(file_pt, "\n");
239  }
240  fprintf(file_pt, "\n");
241  }
242 
243 
244  //=======================================================================
245  /// The C-style output function for n_plot points in each coordinate direction
246  //=======================================================================
247  template<>
248  void QHermiteElement<1>::output(FILE* file_pt, const unsigned& n_plot)
249  {
250  // Local variables
251  Vector<double> s(1);
252 
253  // Tecplot header info
254  fprintf(file_pt, "ZONE I=%i \n", n_plot);
255 
256  // Find the dimension of the first node
257  unsigned n_dim = this->nodal_dimension();
258 
259  // Loop over element nodes
260  for (unsigned l = 0; l < n_plot; l++)
261  {
262  s[0] = -1.0 + l * 2.0 / (n_plot - 1);
263  // Output the coordinates
264  for (unsigned i = 0; i < n_dim; i++)
265  {
266  fprintf(file_pt, "%g ", interpolated_x(s, i));
267  }
268  fprintf(file_pt, "\n");
269  }
270  }
271 
272 
273  //===========================================================
274  /// Function to setup geometrical information for lower-dimensional
275  /// FaceElements (single node elements)
276  //===========================================================
277  template<>
278  void QHermiteElement<1>::build_face_element(const int& face_index,
279  FaceElement* face_element_pt)
280  {
281  // Set the nodal dimension from the "bulk"
282  face_element_pt->set_nodal_dimension(node_pt(0)->ndim());
283 
284  // Set the pointer to the "bulk" element
285  face_element_pt->bulk_element_pt() = this;
286 
287 #ifdef OOMPH_HAS_MPI
288  // Pass on non-halo ID
289  face_element_pt->set_halo(Non_halo_proc_ID);
290 #endif
291 
292  // Resize the storage for the original number of values at the (one and
293  // only) node of the face element.
294  face_element_pt->nbulk_value_resize(1);
295 
296  // Resize the storage for the bulk node number corresponding to the (one
297  // and only) node of the face element
298  face_element_pt->bulk_node_number_resize(1);
299 
300  // Set the face index in the face element
301  face_element_pt->face_index() = face_index;
302 
303  // Now set up the node pointer
304  // The convention is that the "normal", the coordinate, should always point
305  // out of the element
306  switch (face_index)
307  {
308  // Bottom, normal sign is negative (coordinate points into element)
309  case (-1):
310  face_element_pt->node_pt(0) = node_pt(0);
311  face_element_pt->bulk_node_number(0) = 0;
312  face_element_pt->normal_sign() = -1;
313 
314  // Set the pointer to the function that determines the bulk coordinates
315  // in the face element
316  face_element_pt->face_to_bulk_coordinate_fct_pt() =
318 
319  // Set the pointer to the function that determines the mapping of
320  // derivatives
321  face_element_pt->bulk_coordinate_derivatives_fct_pt() =
323 
324  // Set the number of values stored when the node is part of the "bulk"
325  // element.
326  face_element_pt->nbulk_value(0) = required_nvalue(0);
327  break;
328 
329  // Top, normal sign is positive (coordinate points out of element)
330  case (1):
331  face_element_pt->node_pt(0) = node_pt(1);
332  face_element_pt->bulk_node_number(0) = 1;
333  face_element_pt->normal_sign() = +1;
334 
335  // Set the pointer to the function that determines the bulk coordinates
336  // in the face element
337  face_element_pt->face_to_bulk_coordinate_fct_pt() =
339 
340  // Set the pointer to the function that determines the mapping of
341  // derivatives
342  face_element_pt->bulk_coordinate_derivatives_fct_pt() =
344 
345  // Set the number of values stored when the node is part of the "bulk"
346  // element.
347  face_element_pt->nbulk_value(0) = required_nvalue(1);
348  break;
349 
350  // Other cases
351  default:
352  std::ostringstream error_message;
353  error_message << "Face_index should only take "
354  << "the values +/-1, not " << face_index << std::endl;
355 
356  throw OomphLibError(error_message.str(),
357  OOMPH_CURRENT_FUNCTION,
358  OOMPH_EXCEPTION_LOCATION);
359  }
360  }
361 
362  /// /////////////////////////////////////////////////////////////
363  // 2D Hermite elements
364  /// /////////////////////////////////////////////////////////////
365 
366 
367  //=======================================================================
368  /// Shape function for specific QHermiteElement<2>
369  //=======================================================================
370  template<>
372  {
373  // Local storage
374  double Psi[2][2][2];
375 
376  // Call the OneDimensional Shape functions
377  OneDimHermite::shape(s[0], Psi[0]);
378  OneDimHermite::shape(s[1], Psi[1]);
379 
380  // Set up the two dimensional shape functions
381  // Set up the functions at corner 0
382  // psi_0 = 1 when s1 = 0, s2 = 0
383  psi(0, 0) = Psi[0][0][0] * Psi[1][0][0];
384  // dpsi_0/ds1 = 1 when s1 = 0, s2 = 0
385  psi(0, 1) = Psi[0][0][1] * Psi[1][0][0];
386  // dpsi_0/ds2 = 1 when s1 = 0, s2 = 0
387  psi(0, 2) = Psi[0][0][0] * Psi[1][0][1];
388  // dpsi_0/ds2ds1 = 1 when s1 = 0, s2 = 0
389  psi(0, 3) = Psi[0][0][1] * Psi[1][0][1];
390 
391  // Set up the functions at corner 1
392  // psi_1 = 1 when s1 = 1, s2 = 0
393  psi(1, 0) = Psi[0][1][0] * Psi[1][0][0];
394  // dpsi_1/ds1 = 1 when s1 = 1, s2 = 0
395  psi(1, 1) = Psi[0][1][1] * Psi[1][0][0];
396  // dpsi_1/ds2 = 1 when s1 = 1, s2 = 0
397  psi(1, 2) = Psi[0][1][0] * Psi[1][0][1];
398  // dpsi_1/ds1ds2 = 1 when s1 = 1, s2 = 0
399  psi(1, 3) = Psi[0][1][1] * Psi[1][0][1];
400 
401  // Set up the functions at the corner 2
402  // psi_2 = 1 when s1 = 0, s2 = 1
403  psi(2, 0) = Psi[0][0][0] * Psi[1][1][0];
404  // dpsi_2/ds1 = 1 when s1 = 0, s2 = 1
405  psi(2, 1) = Psi[0][0][1] * Psi[1][1][0];
406  // dpsi_2/ds2 = 1 when s1 = 0, s2 = 1
407  psi(2, 2) = Psi[0][0][0] * Psi[1][1][1];
408  // dpsi_2/ds2ds1 = 1 when s1 = 0, s2 = 1
409  psi(2, 3) = Psi[0][0][1] * Psi[1][1][1];
410 
411  // Set up the functions at corner 3
412  // psi_3 = 1 when s1 = 1, s2 = 1
413  psi(3, 0) = Psi[0][1][0] * Psi[1][1][0];
414  // dpsi_3/ds1 = 1 when s1 = 1, s2 = 1
415  psi(3, 1) = Psi[0][1][1] * Psi[1][1][0];
416  // dpsi_3/ds2 = 1 when s1 = 1, s2 = 1
417  psi(3, 2) = Psi[0][1][0] * Psi[1][1][1];
418  // dpsi_3/ds1ds2 = 1 when s1 = 1, s2 = 1
419  psi(3, 3) = Psi[0][1][1] * Psi[1][1][1];
420  }
421 
422  //=======================================================================
423  /// Derivatives of shape functions for specific QHermiteElement<2>
424  //=======================================================================
425  template<>
427  Shape& psi,
428  DShape& dpsids) const
429  {
430  // Local storage
431  double Psi[2][2][2];
432  double DPsi[2][2][2];
433  // Call the OneDimensional Shape functions
434  OneDimHermite::shape(s[0], Psi[0]);
435  OneDimHermite::shape(s[1], Psi[1]);
436  OneDimHermite::dshape(s[0], DPsi[0]);
437  OneDimHermite::dshape(s[1], DPsi[1]);
438 
439 
440  // Set up the two dimensional shape functions
441  // Set up the functions at corner 0
442  // psi_0 = 1 when s1 = 0, s2 = 0
443  psi(0, 0) = Psi[0][0][0] * Psi[1][0][0];
444  // dpsi_0/ds1 = 1 when s1 = 0, s2 = 0
445  psi(0, 1) = Psi[0][0][1] * Psi[1][0][0];
446  // dpsi_0/ds2 = 1 when s1 = 0, s2 = 0
447  psi(0, 2) = Psi[0][0][0] * Psi[1][0][1];
448  // dpsi_0/ds2ds1 = 1 when s1 = 0, s2 = 0
449  psi(0, 3) = Psi[0][0][1] * Psi[1][0][1];
450 
451  // Set up the functions at corner 1
452  // psi_1 = 1 when s1 = 1, s2 = 0
453  psi(1, 0) = Psi[0][1][0] * Psi[1][0][0];
454  // dpsi_1/ds1 = 1 when s1 = 1, s2 = 0
455  psi(1, 1) = Psi[0][1][1] * Psi[1][0][0];
456  // dpsi_1/ds2 = 1 when s1 = 1, s2 = 0
457  psi(1, 2) = Psi[0][1][0] * Psi[1][0][1];
458  // dpsi_1/ds1ds2 = 1 when s1 = 1, s2 = 0
459  psi(1, 3) = Psi[0][1][1] * Psi[1][0][1];
460 
461  // Set up the functions at the corner 2
462  // psi_2 = 1 when s1 = 0, s2 = 1
463  psi(2, 0) = Psi[0][0][0] * Psi[1][1][0];
464  // dpsi_2/ds1 = 1 when s1 = 0, s2 = 1
465  psi(2, 1) = Psi[0][0][1] * Psi[1][1][0];
466  // dpsi_2/ds2 = 1 when s1 = 0, s2 = 1
467  psi(2, 2) = Psi[0][0][0] * Psi[1][1][1];
468  // dpsi_2/ds2ds1 = 1 when s1 = 0, s2 = 1
469  psi(2, 3) = Psi[0][0][1] * Psi[1][1][1];
470 
471  // Set up the functions at corner 3
472  // psi_3 = 1 when s1 = 1, s2 = 1
473  psi(3, 0) = Psi[0][1][0] * Psi[1][1][0];
474  // dpsi_3/ds1 = 1 when s1 = 1, s2 = 1
475  psi(3, 1) = Psi[0][1][1] * Psi[1][1][0];
476  // dpsi_3/ds2 = 1 when s1 = 1, s2 = 1
477  psi(3, 2) = Psi[0][1][0] * Psi[1][1][1];
478  // dpsi_3/ds1ds2 = 1 when s1 = 1, s2 = 1
479  psi(3, 3) = Psi[0][1][1] * Psi[1][1][1];
480 
481  // FIRST DERIVATIVES
482 
483  // D/Ds[0]
484 
485  // Set up the functions at corner 0
486  dpsids(0, 0, 0) = DPsi[0][0][0] * Psi[1][0][0];
487  dpsids(0, 1, 0) = DPsi[0][0][1] * Psi[1][0][0];
488  dpsids(0, 2, 0) = DPsi[0][0][0] * Psi[1][0][1];
489  dpsids(0, 3, 0) = DPsi[0][0][1] * Psi[1][0][1];
490 
491  // Set up the functions at corner 1
492  dpsids(1, 0, 0) = DPsi[0][1][0] * Psi[1][0][0];
493  dpsids(1, 1, 0) = DPsi[0][1][1] * Psi[1][0][0];
494  dpsids(1, 2, 0) = DPsi[0][1][0] * Psi[1][0][1];
495  dpsids(1, 3, 0) = DPsi[0][1][1] * Psi[1][0][1];
496 
497  // Set up the functions at the corner 2
498  dpsids(2, 0, 0) = DPsi[0][0][0] * Psi[1][1][0];
499  dpsids(2, 1, 0) = DPsi[0][0][1] * Psi[1][1][0];
500  dpsids(2, 2, 0) = DPsi[0][0][0] * Psi[1][1][1];
501  dpsids(2, 3, 0) = DPsi[0][0][1] * Psi[1][1][1];
502 
503  // Set up the functions at corner 3
504  dpsids(3, 0, 0) = DPsi[0][1][0] * Psi[1][1][0];
505  dpsids(3, 1, 0) = DPsi[0][1][1] * Psi[1][1][0];
506  dpsids(3, 2, 0) = DPsi[0][1][0] * Psi[1][1][1];
507  dpsids(3, 3, 0) = DPsi[0][1][1] * Psi[1][1][1];
508 
509  // D/Ds[1]
510 
511  // Set up the functions at corner 0
512  dpsids(0, 0, 1) = Psi[0][0][0] * DPsi[1][0][0];
513  dpsids(0, 1, 1) = Psi[0][0][1] * DPsi[1][0][0];
514  dpsids(0, 2, 1) = Psi[0][0][0] * DPsi[1][0][1];
515  dpsids(0, 3, 1) = Psi[0][0][1] * DPsi[1][0][1];
516 
517  // Set up the functions at corner 1
518  dpsids(1, 0, 1) = Psi[0][1][0] * DPsi[1][0][0];
519  dpsids(1, 1, 1) = Psi[0][1][1] * DPsi[1][0][0];
520  dpsids(1, 2, 1) = Psi[0][1][0] * DPsi[1][0][1];
521  dpsids(1, 3, 1) = Psi[0][1][1] * DPsi[1][0][1];
522 
523  // Set up the functions at the corner 2
524  dpsids(2, 0, 1) = Psi[0][0][0] * DPsi[1][1][0];
525  dpsids(2, 1, 1) = Psi[0][0][1] * DPsi[1][1][0];
526  dpsids(2, 2, 1) = Psi[0][0][0] * DPsi[1][1][1];
527  dpsids(2, 3, 1) = Psi[0][0][1] * DPsi[1][1][1];
528 
529  // Set up the functions at corner 3
530  dpsids(3, 0, 1) = Psi[0][1][0] * DPsi[1][1][0];
531  dpsids(3, 1, 1) = Psi[0][1][1] * DPsi[1][1][0];
532  dpsids(3, 2, 1) = Psi[0][1][0] * DPsi[1][1][1];
533  dpsids(3, 3, 1) = Psi[0][1][1] * DPsi[1][1][1];
534  }
535 
536  //======================================================================
537  /// Second derivatives of the shape functions wrt local coordinates.
538  /// d2psids(i,0) = \f$ \partial^2 \psi_j / \partial s_0^2 \f$
539  /// d2psids(i,1) = \f$ \partial^2 \psi_j / \partial s_1^2 \f$
540  /// d2psids(i,2) = \f$ \partial^2 \psi_j / \partial s_0 \partial s_1 \f$
541  //======================================================================
542  template<>
544  Shape& psi,
545  DShape& dpsids,
546  DShape& d2psids) const
547  {
548  // Local storage
549  double Psi[2][2][2];
550  double DPsi[2][2][2];
551  double D2Psi[2][2][2];
552 
553  // Call the OneDimensional Shape functions
554  OneDimHermite::shape(s[0], Psi[0]);
555  OneDimHermite::shape(s[1], Psi[1]);
556  OneDimHermite::dshape(s[0], DPsi[0]);
557  OneDimHermite::dshape(s[1], DPsi[1]);
558  OneDimHermite::d2shape(s[0], D2Psi[0]);
559  OneDimHermite::d2shape(s[1], D2Psi[1]);
560 
561  // Set up the two dimensional shape functions
562  // Set up the functions at corner 0
563  // psi_0 = 1 when s1 = 0, s2 = 0
564  psi(0, 0) = Psi[0][0][0] * Psi[1][0][0];
565  // dpsi_0/ds1 = 1 when s1 = 0, s2 = 0
566  psi(0, 1) = Psi[0][0][1] * Psi[1][0][0];
567  // dpsi_0/ds2 = 1 when s1 = 0, s2 = 0
568  psi(0, 2) = Psi[0][0][0] * Psi[1][0][1];
569  // dpsi_0/ds2ds1 = 1 when s1 = 0, s2 = 0
570  psi(0, 3) = Psi[0][0][1] * Psi[1][0][1];
571 
572  // Set up the functions at corner 1
573  // psi_1 = 1 when s1 = 1, s2 = 0
574  psi(1, 0) = Psi[0][1][0] * Psi[1][0][0];
575  // dpsi_1/ds1 = 1 when s1 = 1, s2 = 0
576  psi(1, 1) = Psi[0][1][1] * Psi[1][0][0];
577  // dpsi_1/ds2 = 1 when s1 = 1, s2 = 0
578  psi(1, 2) = Psi[0][1][0] * Psi[1][0][1];
579  // dpsi_1/ds1ds2 = 1 when s1 = 1, s2 = 0
580  psi(1, 3) = Psi[0][1][1] * Psi[1][0][1];
581 
582  // Set up the functions at the corner 2
583  // psi_2 = 1 when s1 = 0, s2 = 1
584  psi(2, 0) = Psi[0][0][0] * Psi[1][1][0];
585  // dpsi_2/ds1 = 1 when s1 = 0, s2 = 1
586  psi(2, 1) = Psi[0][0][1] * Psi[1][1][0];
587  // dpsi_2/ds2 = 1 when s1 = 0, s2 = 1
588  psi(2, 2) = Psi[0][0][0] * Psi[1][1][1];
589  // dpsi_2/ds2ds1 = 1 when s1 = 0, s2 = 1
590  psi(2, 3) = Psi[0][0][1] * Psi[1][1][1];
591 
592  // Set up the functions at corner 3
593  // psi_3 = 1 when s1 = 1, s2 = 1
594  psi(3, 0) = Psi[0][1][0] * Psi[1][1][0];
595  // dpsi_3/ds1 = 1 when s1 = 1, s2 = 1
596  psi(3, 1) = Psi[0][1][1] * Psi[1][1][0];
597  // dpsi_3/ds2 = 1 when s1 = 1, s2 = 1
598  psi(3, 2) = Psi[0][1][0] * Psi[1][1][1];
599  // dpsi_3/ds1ds2 = 1 when s1 = 1, s2 = 1
600  psi(3, 3) = Psi[0][1][1] * Psi[1][1][1];
601 
602  // FIRST DERIVATIVES
603 
604  // D/Ds[0]
605 
606  // Set up the functions at corner 0
607  dpsids(0, 0, 0) = DPsi[0][0][0] * Psi[1][0][0];
608  dpsids(0, 1, 0) = DPsi[0][0][1] * Psi[1][0][0];
609  dpsids(0, 2, 0) = DPsi[0][0][0] * Psi[1][0][1];
610  dpsids(0, 3, 0) = DPsi[0][0][1] * Psi[1][0][1];
611 
612  // Set up the functions at corner 1
613  dpsids(1, 0, 0) = DPsi[0][1][0] * Psi[1][0][0];
614  dpsids(1, 1, 0) = DPsi[0][1][1] * Psi[1][0][0];
615  dpsids(1, 2, 0) = DPsi[0][1][0] * Psi[1][0][1];
616  dpsids(1, 3, 0) = DPsi[0][1][1] * Psi[1][0][1];
617 
618  // Set up the functions at the corner 2
619  dpsids(2, 0, 0) = DPsi[0][0][0] * Psi[1][1][0];
620  dpsids(2, 1, 0) = DPsi[0][0][1] * Psi[1][1][0];
621  dpsids(2, 2, 0) = DPsi[0][0][0] * Psi[1][1][1];
622  dpsids(2, 3, 0) = DPsi[0][0][1] * Psi[1][1][1];
623 
624  // Set up the functions at corner 3
625  dpsids(3, 0, 0) = DPsi[0][1][0] * Psi[1][1][0];
626  dpsids(3, 1, 0) = DPsi[0][1][1] * Psi[1][1][0];
627  dpsids(3, 2, 0) = DPsi[0][1][0] * Psi[1][1][1];
628  dpsids(3, 3, 0) = DPsi[0][1][1] * Psi[1][1][1];
629 
630  // D/Ds[1]
631 
632  // Set up the functions at corner 0
633  dpsids(0, 0, 1) = Psi[0][0][0] * DPsi[1][0][0];
634  dpsids(0, 1, 1) = Psi[0][0][1] * DPsi[1][0][0];
635  dpsids(0, 2, 1) = Psi[0][0][0] * DPsi[1][0][1];
636  dpsids(0, 3, 1) = Psi[0][0][1] * DPsi[1][0][1];
637 
638  // Set up the functions at corner 1
639  dpsids(1, 0, 1) = Psi[0][1][0] * DPsi[1][0][0];
640  dpsids(1, 1, 1) = Psi[0][1][1] * DPsi[1][0][0];
641  dpsids(1, 2, 1) = Psi[0][1][0] * DPsi[1][0][1];
642  dpsids(1, 3, 1) = Psi[0][1][1] * DPsi[1][0][1];
643 
644  // Set up the functions at the corner 2
645  dpsids(2, 0, 1) = Psi[0][0][0] * DPsi[1][1][0];
646  dpsids(2, 1, 1) = Psi[0][0][1] * DPsi[1][1][0];
647  dpsids(2, 2, 1) = Psi[0][0][0] * DPsi[1][1][1];
648  dpsids(2, 3, 1) = Psi[0][0][1] * DPsi[1][1][1];
649 
650  // Set up the functions at corner 3
651  dpsids(3, 0, 1) = Psi[0][1][0] * DPsi[1][1][0];
652  dpsids(3, 1, 1) = Psi[0][1][1] * DPsi[1][1][0];
653  dpsids(3, 2, 1) = Psi[0][1][0] * DPsi[1][1][1];
654  dpsids(3, 3, 1) = Psi[0][1][1] * DPsi[1][1][1];
655 
656  // SECOND DERIVATIVES
657  // Convention: index 0 is d^2/ds[0]^2,
658  // index 1 is d^2/ds[1]^2,
659  // index 2 is the mixed derivative
660 
661  // D^2/Ds[0]^2
662 
663  // Set up the functions at corner 0
664  d2psids(0, 0, 0) = D2Psi[0][0][0] * Psi[1][0][0];
665  d2psids(0, 1, 0) = D2Psi[0][0][1] * Psi[1][0][0];
666  d2psids(0, 2, 0) = D2Psi[0][0][0] * Psi[1][0][1];
667  d2psids(0, 3, 0) = D2Psi[0][0][1] * Psi[1][0][1];
668 
669  // Set up the functions at corner 1
670  d2psids(1, 0, 0) = D2Psi[0][1][0] * Psi[1][0][0];
671  d2psids(1, 1, 0) = D2Psi[0][1][1] * Psi[1][0][0];
672  d2psids(1, 2, 0) = D2Psi[0][1][0] * Psi[1][0][1];
673  d2psids(1, 3, 0) = D2Psi[0][1][1] * Psi[1][0][1];
674 
675  // Set up the functions at the corner 2
676  d2psids(2, 0, 0) = D2Psi[0][0][0] * Psi[1][1][0];
677  d2psids(2, 1, 0) = D2Psi[0][0][1] * Psi[1][1][0];
678  d2psids(2, 2, 0) = D2Psi[0][0][0] * Psi[1][1][1];
679  d2psids(2, 3, 0) = D2Psi[0][0][1] * Psi[1][1][1];
680 
681  // Set up the functions at corner 3
682  d2psids(3, 0, 0) = D2Psi[0][1][0] * Psi[1][1][0];
683  d2psids(3, 1, 0) = D2Psi[0][1][1] * Psi[1][1][0];
684  d2psids(3, 2, 0) = D2Psi[0][1][0] * Psi[1][1][1];
685  d2psids(3, 3, 0) = D2Psi[0][1][1] * Psi[1][1][1];
686 
687  // D^2/Ds[1]^2
688 
689  // Set up the functions at corner 0
690  d2psids(0, 0, 1) = Psi[0][0][0] * D2Psi[1][0][0];
691  d2psids(0, 1, 1) = Psi[0][0][1] * D2Psi[1][0][0];
692  d2psids(0, 2, 1) = Psi[0][0][0] * D2Psi[1][0][1];
693  d2psids(0, 3, 1) = Psi[0][0][1] * D2Psi[1][0][1];
694 
695  // Set up the functions at corner 1
696  d2psids(1, 0, 1) = Psi[0][1][0] * D2Psi[1][0][0];
697  d2psids(1, 1, 1) = Psi[0][1][1] * D2Psi[1][0][0];
698  d2psids(1, 2, 1) = Psi[0][1][0] * D2Psi[1][0][1];
699  d2psids(1, 3, 1) = Psi[0][1][1] * D2Psi[1][0][1];
700 
701  // Set up the functions at the corner 2
702  d2psids(2, 0, 1) = Psi[0][0][0] * D2Psi[1][1][0];
703  d2psids(2, 1, 1) = Psi[0][0][1] * D2Psi[1][1][0];
704  d2psids(2, 2, 1) = Psi[0][0][0] * D2Psi[1][1][1];
705  d2psids(2, 3, 1) = Psi[0][0][1] * D2Psi[1][1][1];
706 
707  // Set up the functions at corner 3
708  d2psids(3, 0, 1) = Psi[0][1][0] * D2Psi[1][1][0];
709  d2psids(3, 1, 1) = Psi[0][1][1] * D2Psi[1][1][0];
710  d2psids(3, 2, 1) = Psi[0][1][0] * D2Psi[1][1][1];
711  d2psids(3, 3, 1) = Psi[0][1][1] * D2Psi[1][1][1];
712 
713  // D^2/Ds[0]Ds[1]
714 
715  // Set up the functions at corner 0
716  d2psids(0, 0, 2) = DPsi[0][0][0] * DPsi[1][0][0];
717  d2psids(0, 1, 2) = DPsi[0][0][1] * DPsi[1][0][0];
718  d2psids(0, 2, 2) = DPsi[0][0][0] * DPsi[1][0][1];
719  d2psids(0, 3, 2) = DPsi[0][0][1] * DPsi[1][0][1];
720 
721  // Set up the functions at corner 1
722  d2psids(1, 0, 2) = DPsi[0][1][0] * DPsi[1][0][0];
723  d2psids(1, 1, 2) = DPsi[0][1][1] * DPsi[1][0][0];
724  d2psids(1, 2, 2) = DPsi[0][1][0] * DPsi[1][0][1];
725  d2psids(1, 3, 2) = DPsi[0][1][1] * DPsi[1][0][1];
726 
727  // Set up the functions at the corner 2
728  d2psids(2, 0, 2) = DPsi[0][0][0] * DPsi[1][1][0];
729  d2psids(2, 1, 2) = DPsi[0][0][1] * DPsi[1][1][0];
730  d2psids(2, 2, 2) = DPsi[0][0][0] * DPsi[1][1][1];
731  d2psids(2, 3, 2) = DPsi[0][0][1] * DPsi[1][1][1];
732 
733  // Set up the functions at corner 3
734  d2psids(3, 0, 2) = DPsi[0][1][0] * DPsi[1][1][0];
735  d2psids(3, 1, 2) = DPsi[0][1][1] * DPsi[1][1][0];
736  d2psids(3, 2, 2) = DPsi[0][1][0] * DPsi[1][1][1];
737  d2psids(3, 3, 2) = DPsi[0][1][1] * DPsi[1][1][1];
738  }
739 
740 
741  //===========================================================
742  /// The output function for QHermiteElement<2,ORDER>
743  //===========================================================
744  template<>
745  void QHermiteElement<2>::output(std::ostream& outfile)
746  {
747  // Tecplot header info
748  outfile << "ZONE I=" << 2 << ", J=" << 2 << std::endl;
749 
750  // Find the dimension of the node
751  unsigned n_dim = this->nodal_dimension();
752 
753  // Loop over element nodes
754  for (unsigned l2 = 0; l2 < 2; l2++)
755  {
756  for (unsigned l1 = 0; l1 < 2; l1++)
757  {
758  unsigned l = l2 * 2 + l1;
759 
760  // Loop over the dimensions and output the position
761  for (unsigned i = 0; i < n_dim; i++)
762  {
763  outfile << node_pt(l)->x(i) << " ";
764  }
765 
766  // Find out number of types of dof stored at each node
767  unsigned n_position_type = node_pt(l)->nposition_type();
768  // Loop over the additional positional dofs
769  for (unsigned k = 1; k < n_position_type; k++)
770  {
771  for (unsigned i = 0; i < n_dim; i++)
772  {
773  outfile << node_pt(l)->x_gen(k, i) << " ";
774  }
775  }
776 
777  // Find out how many data values at the node
778  unsigned initial_nvalue = node_pt(l)->nvalue();
779  // Loop over the data and output whether pinned or not
780  for (unsigned i = 0; i < initial_nvalue; i++)
781  {
782  outfile << node_pt(l)->is_pinned(i) << " ";
783  }
784  outfile << std::endl;
785  }
786  }
787  outfile << std::endl;
788  }
789 
790  //=======================================================================
791  /// The output function for n_plot points in each coordinate direction
792  //=======================================================================
793  template<>
794  void QHermiteElement<2>::output(std::ostream& outfile, const unsigned& n_plot)
795  {
796  // Local variables
797  Vector<double> s(2);
798 
799  // Tecplot header info
800  outfile << "ZONE I=" << n_plot << ", J=" << n_plot << std::endl;
801 
802  // Find the dimension of the first node
803  unsigned n_dim = this->nodal_dimension();
804 
805  // Loop over plot points
806  for (unsigned l2 = 0; l2 < n_plot; l2++)
807  {
808  s[1] = -1.0 + l2 * 2.0 / (n_plot - 1);
809 
810  for (unsigned l1 = 0; l1 < n_plot; l1++)
811  {
812  s[0] = -1.0 + l1 * 2.0 / (n_plot - 1);
813 
814  // Output the coordinates
815  for (unsigned i = 0; i < n_dim; i++)
816  {
817  outfile << interpolated_x(s, i) << " ";
818  }
819  }
820  }
821  outfile << std::endl;
822  }
823 
824 
825  //===========================================================
826  /// The C-style output function for QHermiteElement<2,ORDER>
827  //===========================================================
828  template<>
829  void QHermiteElement<2>::output(FILE* file_pt)
830  {
831  // Tecplot header info
832  fprintf(file_pt, "ZONE I=2, J=2");
833 
834  // Find the dimension of the node
835  unsigned n_dim = this->nodal_dimension();
836 
837  // Loop over element nodes
838  for (unsigned l2 = 0; l2 < 2; l2++)
839  {
840  for (unsigned l1 = 0; l1 < 2; l1++)
841  {
842  unsigned l = l2 * 2 + l1;
843 
844  // Loop over the dimensions and output the position
845  for (unsigned i = 0; i < n_dim; i++)
846  {
847  fprintf(file_pt, "%g ", node_pt(l)->x(i));
848  }
849 
850  // Find out number of types of dof stored at each node
851  unsigned n_position_type = node_pt(l)->nposition_type();
852  // Loop over the additional positional dofs
853  for (unsigned k = 1; k < n_position_type; k++)
854  {
855  for (unsigned i = 0; i < n_dim; i++)
856  {
857  fprintf(file_pt, "%g ", node_pt(l)->x_gen(k, i));
858  }
859  }
860 
861  // Find out how many data values at the node
862  unsigned initial_nvalue = node_pt(l)->nvalue();
863  // Loop over the data and output whether pinned or not
864  for (unsigned i = 0; i < initial_nvalue; i++)
865  {
866  fprintf(file_pt, "%i ", node_pt(l)->is_pinned(i));
867  }
868  fprintf(file_pt, "\n");
869  }
870  }
871  fprintf(file_pt, "\n");
872  }
873 
874  //=======================================================================
875  /// The C-style output function for n_plot points in each coordinate direction
876  //=======================================================================
877  template<>
878  void QHermiteElement<2>::output(FILE* file_pt, const unsigned& n_plot)
879  {
880  // Local variables
881  Vector<double> s(2);
882 
883  // Tecplot header info
884  fprintf(file_pt, "ZONE I=%i, J=%i \n", n_plot, n_plot);
885 
886  // Find the dimension of the nodes
887  unsigned n_dim = this->nodal_dimension();
888 
889  // Loop over plot points
890  for (unsigned l2 = 0; l2 < n_plot; l2++)
891  {
892  s[1] = -1.0 + l2 * 2.0 / (n_plot - 1);
893  for (unsigned l1 = 0; l1 < n_plot; l1++)
894  {
895  s[0] = -1.0 + l1 * 2.0 / (n_plot - 1);
896 
897  // Output the coordinates
898  for (unsigned i = 0; i < n_dim; i++)
899  {
900  fprintf(file_pt, "%g ", interpolated_x(s, i));
901  }
902  }
903  }
904  fprintf(file_pt, "\n");
905  }
906 
907 
908  //=======================================================================
909  /// Function to setup geometrical information for lower-dimensional
910  /// FaceElements (of type QHermiteElement<1>).
911  //=======================================================================
912  template<>
913  void QHermiteElement<2>::build_face_element(const int& face_index,
914  FaceElement* face_element_pt)
915  {
916  // Set the nodal dimension from the "bulk"
917  face_element_pt->set_nodal_dimension(node_pt(0)->ndim());
918 
919  // Set the pointer to the "bulk" element
920  face_element_pt->bulk_element_pt() = this;
921 
922 #ifdef OOMPH_HAS_MPI
923  // Pass on non-halo proc ID
924  face_element_pt->set_halo(Non_halo_proc_ID);
925 #endif
926 
927  // Resize the bulk_position_type translation scheme to the number of
928  // position types in the 1D element: 2 (position and slope)
929  face_element_pt->bulk_position_type_resize(2);
930 
931  // Resize the storage for the original number of values at
932  // the two nodes of the FaceElement
933  face_element_pt->nbulk_value_resize(2);
934 
935  // Resize the storage for the bulk node numbers coressponding to the
936  // two nodes of the FaceElement
937  face_element_pt->bulk_node_number_resize(2);
938 
939  // Set the face index in the face element
940  // The faces are
941  // +1 East
942  // -1 West
943  // +2 North
944  // -2 South
945 
946  // Set the face index in the face element
947  face_element_pt->face_index() = face_index;
948 
949  // Now set up the node pointers
950  // The convention here is that interior_tangent X tangent X tangent
951  // is the OUTWARD normal
952  // IMPORTANT NOTE: Need to ensure that numbering is consistent here
953  // i.e. node numbers increase in positive x and y directions as they should
954  // If not, normals will be inward.
955  switch (face_index)
956  {
957  unsigned bulk_number;
958  // West face, normal sign is positive
959  case (-1):
960  // Set the pointer to the bulk coordinate translation scheme
961  face_element_pt->face_to_bulk_coordinate_fct_pt() =
963 
964  // Set the pointer to the derivative mappings
965  face_element_pt->bulk_coordinate_derivatives_fct_pt() =
967 
968  for (unsigned i = 0; i < 2; i++)
969  {
970  bulk_number = i * 2;
971  face_element_pt->node_pt(i) = node_pt(bulk_number);
972  face_element_pt->bulk_node_number(i) = bulk_number;
973  face_element_pt->normal_sign() = 1;
974  // Set the number of values originally stored at this node
975  face_element_pt->nbulk_value(i) = required_nvalue(bulk_number);
976  // Set the position type for the slope, which is in the s[1]
977  // direction, so is position_type 2 in the "bulk" element
978  face_element_pt->bulk_position_type(1) = 2;
979  }
980  break;
981  // South face, normal sign is positive
982  case (-2):
983  // Set the pointer to the bulk coordinate translation scheme
984  face_element_pt->face_to_bulk_coordinate_fct_pt() =
986 
987  // Set the pointer to the derivative mappings
988  face_element_pt->bulk_coordinate_derivatives_fct_pt() =
990 
991  for (unsigned i = 0; i < 2; i++)
992  {
993  bulk_number = i;
994  face_element_pt->node_pt(i) = node_pt(bulk_number);
995  face_element_pt->bulk_node_number(i) = bulk_number;
996  face_element_pt->normal_sign() = 1;
997  // Set the number of values originally stored at this node
998  face_element_pt->nbulk_value(i) = required_nvalue(bulk_number);
999  // Set the position type for the slope, which is in the s[0]
1000  // direction, so is position_type 1 in "bulk" element
1001  face_element_pt->bulk_position_type(1) = 1;
1002  }
1003  break;
1004  // East face, normal sign is negative
1005  case (1):
1006  // Set the pointer to the bulk coordinate translation scheme
1007  face_element_pt->face_to_bulk_coordinate_fct_pt() =
1009 
1010  // Set the pointer to the derivative mappings
1011  face_element_pt->bulk_coordinate_derivatives_fct_pt() =
1013 
1014  for (unsigned i = 0; i < 2; i++)
1015  {
1016  bulk_number = 2 * i + 1;
1017  face_element_pt->node_pt(i) = node_pt(bulk_number);
1018  face_element_pt->bulk_node_number(i) = bulk_number;
1019  face_element_pt->normal_sign() = -1;
1020  // Set the number of values originally stored at this node
1021  face_element_pt->nbulk_value(i) = required_nvalue(bulk_number);
1022  // Set the position type for the slope, which is in the s[1]
1023  // direction, so is position_type 2 in the bulk element
1024  face_element_pt->bulk_position_type(1) = 2;
1025  }
1026  break;
1027  // North face, normal sign is negative
1028  case (2):
1029  // Set the pointer to the bulk coordinate translation scheme
1030  face_element_pt->face_to_bulk_coordinate_fct_pt() =
1032 
1033  // Set the pointer to the derivative mappings
1034  face_element_pt->bulk_coordinate_derivatives_fct_pt() =
1036 
1037  for (unsigned i = 0; i < 2; i++)
1038  {
1039  bulk_number = 2 + i;
1040  face_element_pt->node_pt(i) = node_pt(bulk_number);
1041  face_element_pt->bulk_node_number(i) = bulk_number;
1042  face_element_pt->normal_sign() = -1;
1043  // Set the number of values originally stored at this node
1044  face_element_pt->nbulk_value(i) = required_nvalue(bulk_number);
1045  // Set the position type for the slope, which is in the s[0]
1046  // direction, so is position_type 1 in the "bulk" element
1047  face_element_pt->bulk_position_type(1) = 1;
1048  }
1049  break;
1050 
1051  // Now cover the other cases
1052  default:
1053  std::ostringstream error_message;
1054  error_message
1055  << "Face index should only take the values +/- 1 or +/- 2,"
1056  << " not " << face_index << std::endl;
1057  throw OomphLibError(error_message.str(),
1058  OOMPH_CURRENT_FUNCTION,
1059  OOMPH_EXCEPTION_LOCATION);
1060  }
1061  }
1062 
1063  /// //////////////////////////////////////////////////////////////////
1064  // 1D SolidQHermiteElements
1065  /// ///////////////////////////////////////////////////////////////////
1066 
1067 
1068  //=====================================================================
1069  /// Overload the output function
1070  //====================================================================
1071  template<unsigned DIM>
1072  void SolidQHermiteElement<DIM>::output(std::ostream& outfile)
1073  {
1075  }
1076 
1077 
1078  //=======================================================================
1079  /// The output function for n_plot points in each coordinate direction
1080  /// for the 1D element
1081  //=======================================================================
1082  template<>
1083  void SolidQHermiteElement<1>::output(std::ostream& outfile,
1084  const unsigned& n_plot)
1085  {
1086  // Local variables
1087  Vector<double> s(1);
1088 
1089  // Tecplot header info
1090  outfile << "ZONE I=" << n_plot << std::endl;
1091 
1092  // Find the dimension of the nodes
1093  unsigned n_dim = this->nodal_dimension();
1094 
1095  // Find the Lagrangian dimension of the first node
1096  unsigned n_lagr = static_cast<SolidNode*>(node_pt(0))->nlagrangian();
1097 
1098  // Loop over plot points
1099  for (unsigned l = 0; l < n_plot; l++)
1100  {
1101  s[0] = -1.0 + l * 2.0 / (n_plot - 1);
1102 
1103  // Output the Eulerian coordinates
1104  for (unsigned i = 0; i < n_dim; i++)
1105  {
1106  outfile << interpolated_x(s, i) << " ";
1107  }
1108 
1109  // Output the Lagrangian coordinates
1110  for (unsigned i = 0; i < n_lagr; i++)
1111  {
1112  outfile << interpolated_xi(s, i) << " ";
1113  }
1114  outfile << std::endl;
1115  }
1116  }
1117 
1118 
1119  //=====================================================================
1120  /// Overload the C-style output function
1121  //====================================================================
1122  template<unsigned DIM>
1124  {
1126  }
1127 
1128 
1129  //=======================================================================
1130  /// The C-style output function for n_plot points in each coordinate direction
1131  /// for the 1D element
1132  //=======================================================================
1133  template<>
1134  void SolidQHermiteElement<1>::output(FILE* file_pt, const unsigned& n_plot)
1135  {
1136  // Local variables
1137  Vector<double> s(1);
1138 
1139  // Tecplot header info
1140  fprintf(file_pt, "ZONE I=%i\n", n_plot);
1141 
1142  // Find the dimension of the nodes
1143  unsigned n_dim = this->nodal_dimension();
1144 
1145  // Find the Lagrangian dimension of the first node
1146  unsigned n_lagr = static_cast<SolidNode*>(node_pt(0))->nlagrangian();
1147 
1148  // Loop over plot points
1149  for (unsigned l = 0; l < n_plot; l++)
1150  {
1151  s[0] = -1.0 + l * 2.0 / (n_plot - 1);
1152 
1153  // Output the Eulerian coordinates
1154  for (unsigned i = 0; i < n_dim; i++)
1155  {
1156  fprintf(file_pt, "%g ", interpolated_x(s, i));
1157  }
1158 
1159  // Output the Lagrangian coordinates
1160  for (unsigned i = 0; i < n_lagr; i++)
1161  {
1162  fprintf(file_pt, "%g ", interpolated_xi(s, i));
1163  }
1164  fprintf(file_pt, "\n");
1165  }
1166  }
1167 
1168 
1169  /// ////////////////////////////////////////////////////////////////////////
1170  // 2D SolidQHermiteElements
1171  /// ///////////////////////////////////////////////////////////////////////
1172 
1173 
1174  //=====================================================================
1175  /// The output function for any number of points per element
1176  //=====================================================================
1177  template<>
1178  void SolidQHermiteElement<2>::output(std::ostream& outfile,
1179  const unsigned& n_p)
1180  {
1181  // Local variables
1182  Vector<double> s(2);
1183 
1184  // Tecplot header info
1185  outfile << "ZONE I=" << n_p << ", J=" << n_p << std::endl;
1186 
1187  // Find the dimension of the nodes
1188  unsigned n_dim = this->nodal_dimension();
1189 
1190  // Find the Lagrangian dimension of the first node
1191  unsigned n_lagr = static_cast<SolidNode*>(node_pt(0))->nlagrangian();
1192 
1193  // Loop over element nodes
1194  for (unsigned l2 = 0; l2 < n_p; l2++)
1195  {
1196  s[1] = -1.0 + l2 * 2.0 / (n_p - 1);
1197  for (unsigned l1 = 0; l1 < n_p; l1++)
1198  {
1199  s[0] = -1.0 + l1 * 2.0 / (n_p - 1);
1200 
1201  // Output the Eulerian coordinates
1202  for (unsigned i = 0; i < n_dim; i++)
1203  {
1204  outfile << interpolated_x(s, i) << " ";
1205  }
1206 
1207  // Output the Lagrangian coordinates
1208  for (unsigned i = 0; i < n_lagr; i++)
1209  {
1210  outfile << interpolated_xi(s, i) << " ";
1211  }
1212  outfile << std::endl;
1213  }
1214  }
1215  outfile << std::endl;
1216  }
1217 
1218 
1219  //=====================================================================
1220  /// The C-style output function for any number of points per element
1221  //=====================================================================
1222  template<>
1223  void SolidQHermiteElement<2>::output(FILE* file_pt, const unsigned& n_plot)
1224  {
1225  // Local variables
1226  Vector<double> s(2);
1227 
1228  // Tecplot header info
1229  fprintf(file_pt, "ZONE I=%i, J=%i\n", n_plot, n_plot);
1230 
1231  // Find the dimension of the nodes
1232  unsigned n_dim = this->nodal_dimension();
1233 
1234  // Find the Lagrangian dimension of the first node
1235  unsigned n_lagr = static_cast<SolidNode*>(node_pt(0))->nlagrangian();
1236 
1237  // Loop over element nodes
1238  for (unsigned l2 = 0; l2 < n_plot; l2++)
1239  {
1240  s[1] = -1.0 + l2 * 2.0 / (n_plot - 1);
1241  for (unsigned l1 = 0; l1 < n_plot; l1++)
1242  {
1243  s[0] = -1.0 + l1 * 2.0 / (n_plot - 1);
1244 
1245  // Output the Eulerian coordinates
1246  for (unsigned i = 0; i < n_dim; i++)
1247  {
1248  fprintf(file_pt, "%g ", interpolated_x(s, i));
1249  }
1250 
1251  // Output the Lagrangian coordinates
1252  for (unsigned i = 0; i < n_lagr; i++)
1253  {
1254  fprintf(file_pt, "%g ", interpolated_xi(s, i));
1255  }
1256  fprintf(file_pt, "\n");
1257  }
1258  }
1259  fprintf(file_pt, "\n");
1260  }
1261 
1262 
1263  //=======================================================================
1264  /// Function to setup geometrical information for lower-dimensional
1265  /// FaceElements for the solid hermite elements. We need to
1266  /// construct the basic element and then sort out the Lagrangian
1267  /// coordinates
1268  //=======================================================================
1269  template<unsigned DIM>
1271  const int& face_index, FaceElement* face_element_pt)
1272  {
1273  // Build the standard non-solid FaceElement
1274  QHermiteElement<DIM>::build_face_element(face_index, face_element_pt);
1275 
1276  // Set the Lagrangian dimension from the first node of the present element
1277  dynamic_cast<SolidFiniteElement*>(face_element_pt)
1278  ->set_lagrangian_dimension(
1279  static_cast<SolidNode*>(node_pt(0))->nlagrangian());
1280  }
1281 
1282  //==================================================================
1283  /// Force build of templates
1284  //==================================================================
1285  template class QHermiteElement<1>;
1286  template class QHermiteElement<2>;
1287  template class DiagQHermiteElement<1>;
1288  template class DiagQHermiteElement<2>;
1289 
1290 
1291  template class SolidQHermiteElement<1>;
1292  template class SolidQHermiteElement<2>;
1293  template class SolidDiagQHermiteElement<1>;
1294  template class SolidDiagQHermiteElement<2>;
1295 
1296 } // namespace oomph
static char t char * s
Definition: cfortran.h:568
cstr elem_len * i
Definition: cfortran.h:603
A Class for the derivatives of shape functions The class design is essentially the same as Shape,...
Definition: shape.h:278
These elements are exactly the same as QHermiteElements, but they employ the simplifying assumption t...
FaceElements are elements that coincide with the faces of higher-dimensional "bulk" elements....
Definition: elements.h:4338
unsigned & bulk_position_type(const unsigned &i)
Return the position type in the "bulk" element that corresponds to position type i on the FaceElement...
Definition: elements.h:4805
CoordinateMappingFctPt & face_to_bulk_coordinate_fct_pt()
Return the pointer to the function that maps the face coordinate to the bulk coordinate.
Definition: elements.h:4755
void bulk_node_number_resize(const unsigned &i)
Resize the storage for the bulk node numbers.
Definition: elements.h:4818
int & face_index()
Index of the face (a number that uniquely identifies the face in the element)
Definition: elements.h:4626
unsigned & nbulk_value(const unsigned &n)
Return the number of values originally stored at local node n (before the FaceElement added additiona...
Definition: elements.h:4845
FiniteElement *& bulk_element_pt()
Pointer to higher-dimensional "bulk" element.
Definition: elements.h:4735
void bulk_position_type_resize(const unsigned &i)
Resize the storage for bulk_position_type to i entries.
Definition: elements.h:4838
BulkCoordinateDerivativesFctPt & bulk_coordinate_derivatives_fct_pt()
Return the pointer to the function that returns the derivatives of the bulk coordinates wrt the face ...
Definition: elements.h:4770
int & normal_sign()
Sign of outer unit normal (relative to cross-products of tangent vectors in the corresponding "bulk" ...
Definition: elements.h:4612
unsigned & bulk_node_number(const unsigned &n)
Return the bulk node number that corresponds to the n-th local node number.
Definition: elements.h:4825
void nbulk_value_resize(const unsigned &i)
Resize the storage for the number of values originally stored at the local nodes to i entries.
Definition: elements.h:4860
void set_nodal_dimension(const unsigned &nodal_dim)
Set the dimension of the nodes in the element. This will typically only be required when constructing...
Definition: elements.h:1390
Node *& node_pt(const unsigned &n)
Return a pointer to the local node n.
Definition: elements.h:2175
void set_halo(const unsigned &non_halo_proc_ID)
Label the element as halo and specify processor that holds non-halo counterpart.
Definition: elements.h:1151
An OomphLibError object which should be thrown when an run-time error is encountered....
/////////////////////////////////////////////////////////////////// /////////////////////////////////...
void shape(const Vector< double > &s, Shape &psi) const
Function to calculate the geometric shape functions at local coordinate s.
static Gauss< DIM, 3 > Default_integration_scheme
Default integration rule: Gaussian integration of same 'order' as the element.
void build_face_element(const int &face_index, FaceElement *face_element_pt)
Build the lower-dimensional FaceElement of the type QHermiteElement<DIM-1>. The face index takes a va...
void dshape_local(const Vector< double > &s, Shape &psi, DShape &dpsids) const
Function to compute the geometric shape functions and derivatives w.r.t. local coordinates at local c...
void output(std::ostream &outfile)
Output.
void d2shape_local(const Vector< double > &s, Shape &psi, DShape &dpsids, DShape &d2psids) const
Function to compute the geometric shape functions and also first and second derivatives wrt local coo...
A Class for shape functions. In simple cases, the shape functions have only one index that can be tho...
Definition: shape.h:76
////////////////////////////////////////////////////////////////////// //////////////////////////////...
Definition: elements.h:3561
A Class for nodes that deform elastically (i.e. position is an unknown in the problem)....
Definition: nodes.h:1686
unsigned nlagrangian() const
Return number of lagrangian coordinates.
Definition: nodes.h:1870
////////////////////////////////////////////////////////////////////
void output(std::ostream &outfile)
Overload the output function.
void output()
Doc the command line arguments.
void dshape(const double &s, double DPsi[2][2])
Derivatives of 1D Hermite shape functions.
Definition: shape.h:1206
void d2shape(const double &s, double DPsi[2][2])
Second derivatives of the Hermite shape functions.
Definition: shape.h:1217
void shape(const double &s, double Psi[2][2])
Constructor sets the values of the shape functions at the position s.
Definition: shape.h:1194
void faces0(const Vector< double > &s, DenseMatrix< double > &dsbulk_dsface, unsigned &interior_direction)
Function for both faces – the bulk coordinate is fixed on both.
void face1(const Vector< double > &s, Vector< double > &s_bulk)
The translation scheme for the face s0 = 1.0.
void face0(const Vector< double > &s, Vector< double > &s_bulk)
The translation scheme for the face s0 = -1.0.
void faces1(const Vector< double > &s, DenseMatrix< double > &dsbulk_dsface, unsigned &interior_direction)
Function for the north and south faces, along which s1 is fixed.
void faces0(const Vector< double > &s, DenseMatrix< double > &dsbulk_dsface, unsigned &interior_direction)
Function for the east and west faces, along which s0 is fixed.
void face2(const Vector< double > &s, Vector< double > &s_bulk)
The translation scheme for the east face (s0 = 1.0)
void face1(const Vector< double > &s, Vector< double > &s_bulk)
The translation scheme for the south face (s1 = -1.0)
void face0(const Vector< double > &s, Vector< double > &s_bulk)
The translation scheme for the west face (s0 = -1.0)
void face3(const Vector< double > &s, Vector< double > &s_bulk)
The translation scheme for the north face (s1 = 1.0)
//////////////////////////////////////////////////////////////////// ////////////////////////////////...